Gene detail

Detailed information of ENSAPQP00000004270.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4030657.1, BAG family molecular chaperone regulator 3-like, partial, partial [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000004921

TCGTAGGGTTCATCTTCCGATCTTCAAAAACCCGTAGGGTTTATCTTCCTATATTTAAAAGCCGGCAAGTACAAAACCCGTAGGGTTAATCTTCCTAGGATTAAAACCGTAAGTACAGAACTCGTAGGGTCCATCTTCCGACCTTCAAAAACCCGTAGGGTTTATCTTCCTTGGTACAAAACCCGTAGGGTTCATCTTCGTATGTTGAAAATTAAAGGGCGACAGAATTTACAAAATGGCAGCAAATGTTCCACTTCCACCGGGCTGGGAGGCAAGATTTGATGCTTCTTATGGAAGATAttattttataaaccaCTTTACAAAGCAGACAACATGGACAGATCCAAGACTTGCTCCACAGAGTTACGGAGCTCCAGAGCAGATTCCAATGCAGGACTTCTCATTACGAGGTTCGTCTGCACAGTCATACACAACAGCTCGATCATCGCCATCCACACAGAAACAGGAAACTGGCTTCCAAATGTCGATTGACACCAGTGATGAGGAAGACGAGGAATGGAAGAATGCTTTATTTCAGAGTACTCTGCAGAgtcaaaacacaaaaaaacgTCTCATGTTTCATGAAAAAGTCAACATGATAGAGAAATTCAAACAAGAATTCAAAGAACTGGATAAACGTGTTGTTGAGGACACAGTGGAAAAGcatgattatgatgaagaTATGGTGAGAGCCACACTTGCGTCGTTAAAAGATGAAACACGGAGGAAAAAGCGAGAAGCGGAGGAGAAAAAGCGCAAAGAAAAGGAAGCGGAAGAGAAGAGGAAGGCGGCTGAGAGGAAAAAGGAAATGGACAGGATGAAGAAAGAATTGCGAGCAAAACGAGAGGCCGAAAGGAAAGCAGAAACAGAAAGAATGGCGAAGCTTGAAGCGGAAAGAAAGGCGAAATCAGAAGCGGAAAGAAAAGCAAGACTTGAAGCCGAAAGAAAGGCGTTGTTTGAAGCAGAAGCACGCAGGAGACATGCGGCGGCTTCCACCACTCACAGAGCGACCCCAACGGTCGTCCATGTCACTTCTGAACCGCATAAACCTCACGACAGCCGACCAGCACGACAGAAAACCGCACCAAGTAAAACGCCTGCAAGAATTTCCCCAAGGACTCAGACTGGAGGACAGGTTTATGTTTCAGCAAACAGGCTTCGACCGACCGGACCGCAAGCGTCGCTGAGAAAAGGACCAGATCTTCATAATCTTGTGCAAAGCTATACGAGTGCCTCAGGCCCGAACAGATCTCTGGTTTCTGGACCGCAGAGGGCGAACCGCAAAGGACCGAGTGGCTTTCAACCAAAAGCTTCTTTGAGTAAAGGTCCCCAAGCTTCTCTCCACAAAGGGGCCCAATGTGGACTTGTTCACGGACAAGAAAGGCCCTCAATATTTGGACAACGATCAGCTCTTGTCAGCGCAGTTTGACATTAACCTGACTTTTGTTCATTTTCCTTGTccattttttgttcattttccaATATACTACTATTATTCTATAAGATGTATCTATATACCAACATTCTAgatatttttagatttttgCCTAATATTCACCGTTTAGACTAAGAAGGGCCTTGGGCCgattgttcgtagcccgtttagcctaaacggtggataaaacaaatttaaatgaaTATACATAAATTTAGACACTGAATATATTGACAATATTGTTGTATACATTAATGTTGTTTTCAGATTCAACACGTATTTGATTGTTCAATAAATACGTGGATTTGCTGAATAATCTgtagtttattttttaaagtaaaaGTGCTTTTTGGTCTGAGTTTGCAGACCCATTCATACGTACCATTTAAAGTCTGCTCGCTGGTGAGCACGGTACAGTTTTACCATAGAGATCAGTCGCTTTAAAGccagaaaaataaatattacacaAAGTACTAAAatccaaccaatcacaagtcACCAAAACGTCACAGGTCACGTGGTTGCTCGCAGGTGAGCACGGTACAGTTTTTCCATAGAGATCAGTCACGTTAAAGccagaaaaataaatattacacaAAGTACTAAAatccaaccaatcacaagttACCACAACGTCACAGATCACGTGGTCTGGTGCAGGTGAGAACGGTACAGTTTTACCATAGAGATCAGTCACGTTCAAGccagaaaaataaatattacacaAAGTACTAAAATCTAACCAATCACAAGTCACCAAAACGTCACAGATCACGTGGTCTGGTGCCGGTGAGAACGGTACAGTTTTACCATAGAGATCAGTCGGGTTCAAGccagaaaaataaatattacacaAAGTACTAAAatccaaccaatcacaagtcACCACA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006948 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00397 all species →	WW	WW domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001202 all species →	Domain	WW domain	Interproscan
IPR051583 all species →	Family	Yes-associated protein 1	Interproscan
IPR036020 all species →	Homologous_superfamily	WW domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR17616 all species →	YES-ASSOCIATED PROTEIN YAP1 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003713 all species →	Molecular Function	transcription coactivator activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0035329 all species →	Biological Process	hippo signaling	Interproscan
GO:0045944 all species →	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000004270.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.