Detailed information of ENSAPQP00000004374.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3993096.1, Protocadherin Fat 4, partial [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
Q99PF4Cadherin-23 OS=Mus musculus OX=10090 GN=Cdh23 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000235 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092
all species →
VWAvon Willebrand factor type A domainDomainInterproscan
PF07679
all species →
I-setImmunoglobulin I-set domainDomainInterproscan
PF01085
all species →
HH_signalHedgehog amino-terminal signalling domainDomainInterproscan
PF00028
all species →
CadherinCadherin domainDomainInterproscan
PF00017
all species →
SH2SH2 domainDomainInterproscan
PF00008
all species →
EGFEGF-like domainDomainInterproscan
PF13927
all species →
Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002126
all species →
DomainCadherin-likeInterproscan
IPR007110
all species →
DomainImmunoglobulin-like domainInterproscan
IPR020894
all species →
Conserved_siteCadherin conserved siteInterproscan
IPR036465
all species →
Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR015919
all species →
Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002035
all species →
Domainvon Willebrand factor, type AInterproscan
IPR001881
all species →
DomainEGF-like calcium-binding domainInterproscan
IPR000980
all species →
DomainSH2 domainInterproscan
IPR013098
all species →
DomainImmunoglobulin I-setInterproscan
IPR036860
all species →
Homologous_superfamilySH2 domain superfamilyInterproscan
IPR000320
all species →
DomainHedgehog, N-terminal signalling domainInterproscan
IPR003599
all species →
DomainImmunoglobulin subtypeInterproscan
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR001657
all species →
FamilyHedgehog proteinInterproscan
IPR039808
all species →
FamilyCadherinInterproscan
IPR036179
all species →
Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003598
all species →
DomainImmunoglobulin subtype 2Interproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000152
all species →
PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR009045
all species →
Homologous_superfamilyHedgehog signalling/DD-peptidase zinc-binding domain superfamilyInterproscan
IPR018097
all species →
Conserved_siteEGF-like calcium-binding, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24027
all species →
CADHERIN-23Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0007156
all species →
Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0007155
all species →
Biological Processcell adhesionInterproscan
GO:0007267
all species →
Biological Processcell-cell signalingInterproscan
GO:0007275
all species →
Biological Processmulticellular organism developmentInterproscan
GO:0016342
all species →
Cellular Componentcatenin complexInterproscan
GO:0045296
all species →
Molecular Functioncadherin bindingInterproscan
GO:0098609
all species →
Biological Processcell-cell adhesionInterproscan
GO:0098742
all species →
Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSAPQP00000004374.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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