Gene detail

Detailed information of ENSAPQP00000006041.1 in Leptogorgia sarmentosa

Genomic Location: chr13:6228504...6231044
NR annotation: XP_028392702.1, ankyrin and armadillo repeat-containing protein-like [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSAPQT00000006770

ATGGACGAGTTCGACAACGAAGGATGGTCTCATATTCATCATGCGGCGTTTAGTGGTTATCAAAAAAGCATTTCACGATTTGTCAGGTCAAATCAAGAGCATTTGGACCTGTTGACTAAGGATGGCCAGCGAAACACGCCATTATTGCTTGCCTGTAGTAGTGGACAGTTAGATGCTGTTCGTTTTCTTGTAGAATTGGGAGCAAATCTCATCGCTTTTAACGCTTCTGATTTTGGTGTGATCGAAGTAAGCGCTTATTCTGGTCATTTACATGTCTTAGAGTACTTTCTCGATCTAAATTCTCCTGAGGTTAATGTGTACACGTCTTTAGTTCGAGCTCTTGATCACTCAAAAGGATCACGTTTACAGATCGCTTCTTTGAGCTCGCTTACTGAACTATCAAATGCAGAACGCTTAAAGAATCTTTTAAGTTCTGGTGCTATCGAAGGCGTTGTTAAAATCTTGGCCTCGTCTGCTAGCGAAGAAGACGTTGTTATTAactgtttgttgttttttgagAAGATTTTAAAGGTTGATAAAACAGCACATGAGGCAATGAGGCACCATAACTCTGTGAGAGCATTGGTGGGACATCTTAGttctgaaaataaacaaatctaTTTGTTGGCAGTGAAAATCTTAACAGAACTAGCAGTGGACCACCCCGCTACAGTTGAAAATATCACAAACAATAATGGTATTGATTCACTTGTAAAAATTCTTAGAAAAAACAACTCTGAGAATTCTGTCTTGCTTGATGTGCTAAAGACATTGGTGTTGTTTTGCAAAGTTCGATCAAAAACTCAAGACGTGTTTGCCTCGGTAGAGATGGGGTTTGCAACATTAGCTAGTTTGTTGAGAGAATGTAAAAAAAGGAAGGTCCTCGCATGGGCTGGAAGAACCATTGCATTGTTGGTGGAAGGGAACGAACGGAACCAGAATTTATTTGTCAACGAAGACGGCATTCCTTGCCTTGTTCAGATTCTTTCAAAGTCCCGATCACAGGAGGCACAAATGGCAGCAGTTCTGGCAATTAAAGCCATTGCAAATAACGGCAGTGTTGCAAACCAGGAGTTGTTACAACGCAAGGGTTGTGTCAAgattttgacaaaaatgttACGAGAAGGACCGCGACATGATGATGTCCGGCAGTTGATTGGTGAGGCATTGTGGGCCATTGCTGGTTCAGATGCCTCCCAAAGACACTCAATTGCAAAGCACATTGGTATAAATATTCTggttgaatttttaaaaacttcaaaCCATTCATTGAACTTCATTGGTTCAGAAGCTTTGGTCGTATTGGCAGAGGATATAAACAGTAAACAGGATGAAATTGTTGCTGCATCTGCTACCCAATTCATGATTCGTTTAATCGGCAAACAAAATACCCCTGAGCCAACTGTTTTGAGTATCTTCCGAACATTCCGAGCCATTTGTATTCAAACAGGAATTCGTCCACATGTGAAAGGACAGAGTGCCATCATGACAGAAGCTGGGATCAAGTTCCTGGTGAGATATTTTGTTCATTCTAGAAAAGCTCTCATCCAGGCTGACGCAGCTTATACATTAGCCTGCATCGCACTTGGCAACCAAGACACAAATTCTGCAGTGGTAGACATGTTTGAGTTCTCGCGTTTGACCGACTTAATGTCACAAGAAGCCAAGAGTGTTCAGTTAATTGCCGCACATGCCCTGGCTTTATTTGCCTTTAACAACACTCACAACCAGAAGTGCATAGCATCGTCTGGCACTCTTACTTACTCAATGTTCAAACCTCTGTTGGATTCAAACGAGCCGAAAATCCAAGCCAAGGCAGCATTCCAGGTTGTGGTGTTATCCAGAATATTCCCAGATGAGGACCAGGCAAACACCTCAGCTGCAGGCATTCAAATGCTTGTCACCTTGCTCCAGCAAAATGACCAGGAACTCCAAGCAATGTGCAGTAATTTCATAGCAGGATTATCACACACAAGGCCTGGTATTCCTGCTGCATTTGTGTCCATTGGTGCCATCCAAGTTTTGGCTGAACTTTTGAACTCACAGTCTGAGAAGGTCAGGTGTTGTTCAGCAATTGCTTTGGGGTATTTAAGTGTGGACAAATCTGGTCAGAGACAGTTGCTGAATGCATGCAGGAGACGCCCACCTTTGTATAAAATTCTGCGTAGCTATGCAAAGGATGTGAAGCTTTCACAGGAGTTTGTTGAACGGTGGAAGCATTACCAAAGGCTGTCTTGTTTGCCACCAATCACGCAGTCGGTTTTCTTGGTCAACCAATCTGATATGGATGAAACTTACACCATTAATGGAAGTTATGTCAATGAGACGTTTGATGATGGTAGCGAAGACAGTATGTCAGAGGTGTCTGAACAAAACCTACCATTCCTATTGTCGTGA

Transcript

ENSAPQT00000006770

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008992 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03224 all species →	V-ATPase_H_N	V-ATPase subunit H	Repeat	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR004908 all species →	Family	ATPase, V1 complex, subunit H	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR043379 all species →	Family	Ankyrin and armadillo repeat-containing protein	Interproscan
IPR000225 all species →	Repeat	Armadillo	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46464 all species →	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000221 all species →	Cellular Component	vacuolar proton-transporting V-type ATPase, V1 domain	Interproscan
GO:0046961 all species →	Molecular Function	proton-transporting ATPase activity, rotational mechanism	Interproscan
GO:1902600 all species →	Biological Process	proton transmembrane transport	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000006041.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.