Detailed information of ENSAPQP00000006742.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3980206.1, protocadherin [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B8V7Q1Protocadherin-like protein OS=Acropora millepora OX=45264 PE=1 SV=1
O15943Neural-cadherin OS=Drosophila melanogaster OX=7227 GN=CadN PE=1 SV=2
Q99PF4Cadherin-23 OS=Mus musculus OX=10090 GN=Cdh23 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000983 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028
all species →
CadherinCadherin domainDomainInterproscan
PF02210
all species →
Laminin_G_2Laminin G domainDomainInterproscan
PF01049
all species →
CADH_Y-type_LIRCadherin, Y-type LIR-motifFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR050971
all species →
FamilyCadherin domain-containing proteinInterproscan
IPR002126
all species →
DomainCadherin-likeInterproscan
IPR020894
all species →
Conserved_siteCadherin conserved siteInterproscan
IPR015919
all species →
Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001791
all species →
DomainLaminin G domainInterproscan
IPR001881
all species →
DomainEGF-like calcium-binding domainInterproscan
IPR000233
all species →
DomainCadherin, Y-type LIR-motifInterproscan
IPR027397
all species →
Homologous_superfamilyCatenin binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24025
all species →
DESMOGLEIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0005911
all species →
Cellular Componentcell-cell junctionInterproscan
GO:0030057
all species →
Cellular ComponentdesmosomeInterproscan
GO:0098609
all species →
Biological Processcell-cell adhesionInterproscan
GO:0007156
all species →
Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0007155
all species →
Biological Processcell adhesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSAPQP00000006742.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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