Gene detail

Detailed information of ENSAPQP00000008438.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3989045.1, pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000009430

ACACTGTTATAATACCTGCTATATCTTGTACTGCTCCAGGCCAATCAAGATTATTCATCAAATGTCCAGCAGCTTCATTATCTGTGGCCAATTCTCCCCTGTACAGATCAGGAACTAAAGCTAGAAAGTCTCCTTTCTCTGCGATTTCTTTGGCTTCATCTTGGATCTGTTGGTTTAAACCCCACCACTCTTGCAGAACTATCAGACCTCGTGTGCTGCTTGAGTCTTTCCCTTTCACAAACACAGCTGGACATTCACCCTTCGCGTTCTCTGAAGCGAATTTGACGTTTTCAACAAGCATGGACATGGTTCTTGTGAAAGCAAAAGGTTTTGCAAAGAAGGAACTTTTAATAACGTTTGAAACACTCCTGGTGCAGAACATGGTCAACATTGAAGTTCTCTTCAATCTTCTCTCCCCCCGGATGATGGTAATAAATACTGACTGCCAGGGGGGTGAAGGACTCGAAACTACACTACTTCCGCAATTTCAGCTAACAAAAATGGCGTCAATAAGGAGTTGTTTTCGCGGAGGAAATGTTCGATGTTTCTCCAAGAGggattggttgaattttggTGTAAATACTCAGAAAATCTCGTGCTATCGTGCAGcagcagcagcagcagcttCGGTGTCATCTCAAAACACAGGCAGACAGGACATGCACAGCTTGGCAACTGTCAACACATCATCTTCTCAGCTTTCTCTTCTTGGTCCGTCAGTTCGACGTCTTCTCGACTCCTATGGTCTTGACAGACACTCCATTAAACCCAGTGGCCACAAAGGACAGCTTTTAAAAGGAGATGTTCTCAAATACATCAATGAACAcgaaaaaacagaaataaaatttacacATATTTTGCAAGATAAAATCCCAGCCACCAGTCATCCTGTATCTCGAGAATCCGATATTGGCTATGTTGATGTCGCGGTGAATAACACAAGACAAACAGTTGCACAGCAGTTGGTGAAATCCAAGAACACCATACCTCACACATACAACACCATTGATTGCAATGTGGATAACCTCATCGTTCTATGTCAAAAATTTGATAATTCTGTATCAGTTCAGGACTTTGTTATAAAAGCTGCAGCTCTCGCACTTCGTGTCGTACCAAACATGATACAGGTGAATCACATTCATATCGGAATTGCTGTTGATTCTCCGCATGGCATTGTCACTCCAGTTATCAATTATGCAGATCAGCTCAATGTATCTAGCATCTCTCAAATAAGGATGgaCTTCAAAGAAAAAGCTACAAATGGCAAGCTTAGACCTGACCAACTTCCTAATGCTTCATTTACGATCACCAGCCTTGAAAACCAGGGTGTAAAAAGCTTCACAGCAATACTAAATCCATCTCAGTCTGCTACACTTGCTGTAGGTGACCATCAAGTGGTTGTCAGTGATGATTATAAACTCTCTAATGTTGTAAATCTGACGTTATGTTGCGATGGACGGATAGTTGATGAACAATTAGCTGCAGAATGGTTGACTGTGTTTAAGGACTTTATAGAAAACCCATTACAAATGGGATTGTAGTTTAAATAAGTTGAagcttatatatttcatatatacAGTTGTTAAATAGAGACTAAAGTATACTAAATACCTTTCTCTTGGTTTTAAATTCTCCCACAAACTGCACAACCTTTTTAAAATCCAACCTTGACATTCTTCATTTCTGGCTATTCCATCCCGACATCATCTTTCATTTCGACATCATCCTTCATTTGAAAAGCGCGTAAAAAGTtcacagaaatatttttgagaatGCGTGTGGTCGGAGACGGTCAGTCTAATCTTGTCTCCAGTTCTCTCAGCAAGAGAATGATGGTTCTCGTAGTCCTTGCGATTAGATTCCTCATCTTCAACTACAACGCTAAAACATAAAGAGCATATTAGGAGAAAAcctgaactaaactaactttatttatacaggatagctctatcagttctgaactgttcttcttagaggtccagtaaggatcatctcttattgatccagtgttactacactCGAAGcactatcagttctaaactgttcttggAGATTTACAAGGATCGTATTTCATTACCTCATTTGTTTAAGGTGTGGCATGTTATTGACAACTTCGATTAAATCGTCTTGGACGCTTTCATTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P36413	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=pdhC PE=1 SV=2
Q92HK7	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944 GN=pdhC PE=3 SV=1
Q4ULG1	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=pdhC PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001913 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00198 all species →	2-oxoacid_dh	2-oxoacid dehydrogenases acyltransferase (catalytic domain)	Domain	Interproscan
PF02817 all species →	E3_binding	e3 binding domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036625 all species →	Homologous_superfamily	E3-binding domain superfamily	Interproscan
IPR023213 all species →	Homologous_superfamily	Chloramphenicol acetyltransferase-like domain superfamily	Interproscan
IPR001078 all species →	Domain	2-oxoacid dehydrogenase acyltransferase, catalytic domain	Interproscan
IPR045257 all species →	Family	Dihydrolipoamide acetyltransferase/Pyruvate dehydrogenase protein X component	Interproscan
IPR004167 all species →	Domain	Peripheral subunit-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23151 all species →	DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016746 all species →	Molecular Function	acyltransferase activity	Interproscan
GO:0006086 all species →	Biological Process	acetyl-CoA biosynthetic process from pyruvate	Interproscan
GO:0045254 all species →	Cellular Component	pyruvate dehydrogenase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03472	epd; D-erythrose 4-phosphate dehydrogenase	EC:1.2.1.72	Vitamin B6 metabolism	ko00750	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.