Gene detail

Detailed information of ENSAPQP00000008792.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3987458.1, thymidine kinase 2, mitochondrial-like, partial [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000009853

AATACAGTAGTAATAACTACGCGTAAGCAGCCAAGGCTGTTAAATCTTTTACCAAAGCAGGTCAGATTTCACGCCAAAATGAATCGAAAGTTTGCTAATGTATCAACatgtatttgtttacattttcttatttttaccTCCCCCCCGTATTCACCCCCCCTGAATTCGCGCCTTTTCCCGGGCACGAGCATATGGAACAAAATTTTTGGAGGGAAATTCAATTTTACCGGAAGAATTAACCGCCGAAGTGAGCTCATTTTATTACCAATTTTTAGCGAATTTTATCCATTCTTTTCAAAATGCTAGGAGGCGGAAAAAATCACCTGTCAAATTCTTGGTTGTATAATGAAAATGATGTGAAAAGTAatgggaaaaaattaaaatctgtTAAGgtATCAATCGAAGGAAATATAGGCAGTGGAAAGACCACATTACTTGAATATTTTAAGAAACATTCACATGTTGAAGTAATCACTGAACCAGTTGATAAATGGCAGAACATAGGAGATGGCAACACATTGggtTTATTTTATGAGGACCCAAGCAGGTGGAGTTACTTGTTTCAGTCGTATGTCCTGTTGACGATGCTGGAAATCCACAAAAGGAAACAGAATCGCCCAGTGACTTTGATAGAAAGAAGTGTTTACAGTGCTGGTTACTGTTTTGCAGAAAACCTTTATAAAAGTGGGAAGATGTCCTCTGTAGAATATGGAGTGTACAGAAAATGGTTTGATTGGATAATCAAGGAAGAAAAACCTCATGTAGATTTAATAGTGTACCTAAGAACAGATCCTGCAGAATGTTACGAGCGGATTAAAAAGCGAAGTAGAGTGGAAGAAACAGGCATTCCTATGAGTCTGATCACATCAATTCACCAACATCATGAAGACTGGTTGATTAACAAaactaaatttgaaattccAGCACCAGTATTGGTCCTTGATGGCAATAAAGAACTTAAAGATATGTTTAAAATCTATGAAACAAACACTAAAAGTATTCTATTAGGAATGGGAGATGAGCCAGTGACTTGTTGAGAATGAATCGCACCTAACTTTGCATGTTTACTCACTAATTTTTATCCTCAAAACAGTCTTATCGAATATGTCACTTTGTACATAATTAGCCTATACCAATTCttgtaaatattaaatgtaatAAATTATTCAACGTATCGTCTGTCGTTGGTATCGTAAATAGTAACAGCCATTGCACATATCAATGATACCGGGGGTAGTAACctcaaaaacaaacaatttccACACCGCAATAAAAGTGATAAAGACAAGTCAAATATTTAATTACATATTAATCATTGGTcagatattttaaaaagttctgGATATGGTTGTTAGTTCTTTGATAAACTTGCAAAGAAAATGCAACAATTTTGCATCCTACCATTGAAAGTACCATCATGGTAGTTTCAATAAAACTGGTCGCACACAACCATCACCAAAACACTTGGTGATTTGTTCTGCATGgcaaaatttaacaatttatcTACCATGGTGACATCTCCATGGTAGGTTGAAGTTAAACTTTCTTCAAAAAACATTTGCCGCGTCACAGTTTGAATGACAAGAAGATACGCAAGACTCACCTTGGACAGAATGGTGAAAATGATAAATTCGCATCGGATTAAAAACATTCAACTGAACGTGTTGTGGGACGTCCCAGCTACCTTGAAGAAGTTGACGCTGCTGTTCTTCATCTCCTGCGATCTGCACCACGCCGCAAGGGTGGACTTCTGCTGCGTCTTTTCACGGGCGACGGTCGCCTGTCCGGGCGTTGTCGAGGCGATGGCGAACTTTCCCGATTGTTACGTAACGGTCTGCGTTCCTGGTCACGTGTCACTTCACGTGGTTTAGGGCGTTCCATTTCACGTGGTTTTTCCTGCAGTGGTTTTCTCTGCTCTTCTCGAGGTTTCTGCACACCTGCCTTCTTTTCTTCTTCCATGGCAAGCTGACGTTGCCTTCGTCTTTCTTCTCGTTCCTTTGCCTTCATCACGACCTAAAATAATCGAGTTCAAAACC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O00142	Thymidine kinase 2, mitochondrial OS=Homo sapiens OX=9606 GN=TK2 PE=1 SV=4
Q9R088	Thymidine kinase 2, mitochondrial OS=Mus musculus OX=10090 GN=Tk2 PE=1 SV=2
Q9N0C5	Thymidine kinase 2, mitochondrial OS=Macaca fascicularis OX=9541 GN=TK2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002169 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01712 all species →	dNK	Deoxynucleoside kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031314 all species →	Domain	Deoxynucleoside kinase domain	Interproscan
IPR050566 all species →	Family	Deoxyribonucleoside Kinase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002624 all species →	Family	Deoxynucleoside kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10513 all species →	DEOXYNUCLEOSIDE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0019136 all species →	Molecular Function	deoxynucleoside kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006139 all species →	Biological Process	nucleobase-containing compound metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00857	tdk, TK; thymidine kinase	EC:2.7.1.21	Drug metabolism - other enzymes	ko00983	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.