Gene detail

Detailed information of ENSAPQP00000009130.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4017365.1, bifunctional heparan sulfate N-deacetylase N-sulfotransferase 2 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000010250

ATGAGGTTTTGGAAGATCCACTTTGGCGCCTTGTTACGAAACTGTATCGCCTTTGCGACAGTAGTTCTCTTATTTGTAATATGGAGGACATTCCAGACATCACAGAACGGTGTTGGCGGGATATTTGCACGCGATACAATCACCTTTCCCGTTCAGAACTGCCGAGGAATAAACACAAACAAGAATAGCTCGATAATCTCGCAGAGAATTACCGTTTTCAACACATCGTCAACGGTAAACAAACAAGTTTTAATATTGTCGAAATCTAACAAAAGGACACTTCGAATTCTGCTGGCAGTATTGGAAGGCGAGCGTATTTCTTATGATATTCATCATTTAGCTGGGGAACGTAGAGACCATCTGCCATCACTGACAGAACGAGAAACTGGAAAATATGTTGCTATAATATTTACATGTTTTAGACACTATTTTGCGCTAAGTTTGTGGAATAAACGTGTTTTGGATAATTATTGTCGTGCTTTTGGTGTGGGCATTATATTATTCAACCACGAAGAGGCCACAGGCATTTTTCCAAATAGAGAGAAATTTCCTTTTAAAGTACACACGAGTATTCGAGAATTCAAGTCATATCATGTCTCTAAAAATGCTACGATTTTGAGACTTGTCAAGGGAAATAATTTTTTGGATGCCGAAGGCAGATACTCACCCACAAAATGGTCGATATTTGTTCCACACAGTGACACAAATTTTGATAATAATTTTGAAGTTATATCGACCTCAACTTTTATCGATAGTACAATAGAGAATCAAATCGGAATCACCGGGGATCCTAAGGGGTACCCTGTGGTTGTTCACGATTTGGGAAAACGTGATGAAATTAACAGAATATATTTCGGTGCGGGTCTGGAATTTTGGCCgcataaattattatttcttgATGCCCTCGGTTTTGTGTCCATGCATAAGTTAGCCAAGTCACTGGATCGATGGGTACAAGTGGACATTGATGATATATTTGTGGGTAGAACTGGGATAAGAATGAAAAAGGAGGATGTCAAGGCTATGATCATTACTCAGCGAACCCTTCAGAAGCTAGTACCGGGCTTTCAACTCAATCTTGGCTtttctggaaaatattttcaacatggcAGTGAGGAGGAGAATGAAGGTGACAAAGAGTTGATAGAAAATGCCAGTGAGTTTCGATGGTTCGACCACACGTGGGCCCACAAACAACCGCACGAAGTTGATAATCTTGAGGATATGAAACAACAAGTGATATTAAACATGGAGTTTGCCAAGAATCACAACATCCCAGTGGATACAACCTACTCAGTGGCCCCTCACCACTCCGGAGTTTACCCCGTTTATGACATCTTATATGAGGCATGGGAGAAGACTACAGGAATCCGTGTGACCTCAACTGAAGAGTATCCAAATCTAAAACCGCCATGGAAAAGACGAGGATTCATTTACCGAGATGTTATGGTTTTACCACGCCAAACGTGCGGCCTTTTTACACACAATCTGTTTTTGGAGGATTATCCTGGCGGAAAAGAGGTTCTTCTTAAGAGCATTTATGGCGGAGAATTGTTTTACAGTTTCGTCATTAACCCGATAAGTATCTTCATGACTCATCTTTCAAACTATGGCAATGATCGCTTGGCACTCTACACGTTCACCAACGTCATAAAGTTTATTCAGTGCTGGACCAATCTTCGCCTGATGTCGTTGCCCCCAGTGGAACttgggaaaaaatattttgaactatTTCCTGGCGAGCAGGAGCCAATTTGGCATAGTCCTTGCAAAGACCCGCGTCATAAAGATATATGGCCAACGTGGAAGTCATGTGACCAACTTCCTTCATTCCTCATTGTTGGTCCACAGAAAACAGGGACAACAGCTTTACACATGTTTCTCTCCGTCCATCCCAATGTAcgtgaaaacaaacaaaatgcgaAATCTTTCGAAGAGACGCAATTCTTCGCATCCGCAAATTACTACAAAGGCTTAGACTGGTACATGCAAAATTTTCCCAAGGTATCCCCGAATAGTTCAACGTTGCTGTTTGAAAAGACGGCGAATTATTTTGATTCAGTAAAAGCTCCGATGCGAGTCGAAGCGTTGCTTCCCGATGCCAGGATCATTGTTATTTTGAACGACCCAGTCAGACGAGCGTATTCGTGGTATCAGCACATGCGTTCTCACAACAACGATGCAGCGTTGTCTAATGAATTTTACGACTTACTGACGTCGAATATCAGTGCCAGTCCTGCGGTGCGGAGCCTGAAAAATCGTTGTTTGGGTCCAGGTTTATACGCAGAACATCTGGAAAGATGGATGCTTCATTTCCCTGTTTCTCAGATACTAACCGTTGATGGAGAACGACTGAAGTCAAATCCTATTCAAGTCATGTCTCAGGTTCAGAACTTCATTGGAGTAAAGAGAAAGATCGATTACGGAACCCTTTTGAAGTACAATGAACGAAAAGGTTTTTTCTGCCTCACAAGTCGTATGTACAATGGCCATTCTTGCCTGAGGTAA

Transcript

ENSAPQT00000010250

GAACGAACTCAAAACATGGCCGCCACGAAGCAATATTGTTGTGctcaaatgacttaaaaatacCGATGTTTTTAACGGTTTCATGTTTCACTGAGCAACGTAGGGACTTCATCAACAGCTGAGCTATGAAGTATGAGGTTTTGGAAGATCCACTTTGGCGCCTTGTTACGAAACTGTATCGCCTTTGCGACAGTAGTTCTCTTATTTGTAATATGGAGGACATTCCAGACATCACAGAACGGTGTTGGCGGGATATTTGCACGCGATACAATCACCTTTCCCGTTCAGAACTGCCGAGGAATAAACACAAACAAGAATAGCTCGATAATCTCGCAGAGAATTACCGTTTTCAACACATCGTCAACGGTAAACAAACAAGTTTTAATATTGTCGAAATCTAACAAAAGGACACTTCGAATTCTGCTGGCAGTATTGGAAGGCGAGCGTATTTCTTATGATATTCATCATTTAGCTGGGGAACGTAGAGACCATCTGCCATCACTGACAGAACGAGAAACTGGAAAATATGTTGCTATAATATTTACATGTTTTAGACACTATTTTGCGCTAAGTTTGTGGAATAAACGTGTTTTGGATAATTATTGTCGTGCTTTTGGTGTGGGCATTATATTATTCAACCACGAAGAGGCCACAGGCATTTTTCCAAATAGAGAGAAATTTCCTTTTAAAGTACACACGAGTATTCGAGAATTCAAGTCATATCATGTCTCTAAAAATGCTACGATTTTGAGACTTGTCAAGGGAAATAATTTTTTGGATGCCGAAGGCAGATACTCACCCACAAAATGGTCGATATTTGTTCCACACAGTGACACAAATTTTGATAATAATTTTGAAGTTATATCGACCTCAACTTTTATCGATAGTACAATAGAGAATCAAATCGGAATCACCGGGGATCCTAAGGGGTACCCTGTGGTTGTTCACGATTTGGGAAAACGTGATGAAATTAACAGAATATATTTCGGTGCGGGTCTGGAATTTTGGCCgcataaattattatttcttgATGCCCTCGGTTTTGTGTCCATGCATAAGTTAGCCAAGTCACTGGATCGATGGGTACAAGTGGACATTGATGATATATTTGTGGGTAGAACTGGGATAAGAATGAAAAAGGAGGATGTCAAGGCTATGATCATTACTCAGCGAACCCTTCAGAAGCTAGTACCGGGCTTTCAACTCAATCTTGGCTtttctggaaaatattttcaacatggcAGTGAGGAGGAGAATGAAGGTGACAAAGAGTTGATAGAAAATGCCAGTGAGTTTCGATGGTTCGACCACACGTGGGCCCACAAACAACCGCACGAAGTTGATAATCTTGAGGATATGAAACAACAAGTGATATTAAACATGGAGTTTGCCAAGAATCACAACATCCCAGTGGATACAACCTACTCAGTGGCCCCTCACCACTCCGGAGTTTACCCCGTTTATGACATCTTATATGAGGCATGGGAGAAGACTACAGGAATCCGTGTGACCTCAACTGAAGAGTATCCAAATCTAAAACCGCCATGGAAAAGACGAGGATTCATTTACCGAGATGTTATGGTTTTACCACGCCAAACGTGCGGCCTTTTTACACACAATCTGTTTTTGGAGGATTATCCTGGCGGAAAAGAGGTTCTTCTTAAGAGCATTTATGGCGGAGAATTGTTTTACAGTTTCGTCATTAACCCGATAAGTATCTTCATGACTCATCTTTCAAACTATGGCAATGATCGCTTGGCACTCTACACGTTCACCAACGTCATAAAGTTTATTCAGTGCTGGACCAATCTTCGCCTGATGTCGTTGCCCCCAGTGGAACttgggaaaaaatattttgaactatTTCCTGGCGAGCAGGAGCCAATTTGGCATAGTCCTTGCAAAGACCCGCGTCATAAAGATATATGGCCAACGTGGAAGTCATGTGACCAACTTCCTTCATTCCTCATTGTTGGTCCACAGAAAACAGGGACAACAGCTTTACACATGTTTCTCTCCGTCCATCCCAATGTAcgtgaaaacaaacaaaatgcgaAATCTTTCGAAGAGACGCAATTCTTCGCATCCGCAAATTACTACAAAGGCTTAGACTGGTACATGCAAAATTTTCCCAAGGTATCCCCGAATAGTTCAACGTTGCTGTTTGAAAAGACGGCGAATTATTTTGATTCAGTAAAAGCTCCGATGCGAGTCGAAGCGTTGCTTCCCGATGCCAGGATCATTGTTATTTTGAACGACCCAGTCAGACGAGCGTATTCGTGGTATCAGCACATGCGTTCTCACAACAACGATGCAGCGTTGTCTAATGAATTTTACGACTTACTGACGTCGAATATCAGTGCCAGTCCTGCGGTGCGGAGCCTGAAAAATCGTTGTTTGGGTCCAGGTTTATACGCAGAACATCTGGAAAGATGGATGCTTCATTTCCCTGTTTCTCAGATACTAACCGTTGATGGAGAACGACTGAAGTCAAATCCTATTCAAGTCATGTCTCAGGTTCAGAACTTCATTGGAGTAAAGAGAAAGATCGATTACGGAACCCTTTTGAAGTACAATGAACGAAAAGGTTTTTTCTGCCTCACAAGTCGTATGTACAATGGCCATTCTTGCCTGAGGTAATTGTAACACTATACCCCAAGTATAGGTGGTTTGcatttggcc

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9V3L1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase OS=Drosophila melanogaster OX=7227 GN=sfl PE=1 SV=1
O95803	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3 OS=Homo sapiens OX=9606 GN=NDST3 PE=1 SV=1
Q9EQH7	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3 OS=Mus musculus OX=10090 GN=Ndst3 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002036 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00685 all species →	Sulfotransfer_1	Sulfotransferase domain	Domain	Interproscan
PF12062 all species →	HSNSD	heparan sulfate-N-deacetylase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000863 all species →	Domain	Sulfotransferase domain	Interproscan
IPR021930 all species →	Domain	Heparan sulphate-N-deacetylase	Interproscan
IPR037359 all species →	Family	Heparan sulfate sulfotransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10605 all species →	HEPARAN SULFATE SULFOTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008146 all species →	Molecular Function	sulfotransferase activity	Interproscan
GO:0015016 all species →	Molecular Function	[heparan sulfate]-glucosamine N-sulfotransferase activity	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0015014 all species →	Biological Process	heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process	Interproscan
GO:0019213 all species →	Molecular Function	deacetylase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000009130.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.