Detailed information of ENSAPQP00000009502.1 in Leptogorgia sarmentosa

Genomic Location: chr14:811007...814583
NR annotation: CAB4016390.1, F-box WD repeat-containing 2 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q58D00F-box/WD repeat-containing protein 2 OS=Bos taurus OX=9913 GN=FBXW2 PE=2 SV=1
Q9UKT8F-box/WD repeat-containing protein 2 OS=Homo sapiens OX=9606 GN=FBXW2 PE=1 SV=2
B2RZ17F-box/WD repeat-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fbxw2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009424 (this species only) · gene tree & orthology
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00646
all species →
F-boxF-box domainDomainInterproscan
PF00400
all species →
WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019775
all species →
Conserved_siteWD40 repeat, conserved siteInterproscan
IPR042627
all species →
FamilyF-box/WD repeat-containing protein 2Interproscan
IPR001680
all species →
RepeatWD40 repeatInterproscan
IPR020472
all species →
RepeatG-protein beta WD-40 repeatInterproscan
IPR001810
all species →
DomainF-box domainInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036047
all species →
Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44436
all species →
F-BOX/WD REPEAT-CONTAINING PROTEIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSAPQP00000009502.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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