Detailed information of ENSAPQP00000009539.1 in Leptogorgia sarmentosa

Genomic Location: chr16:559735...562053
NR annotation: CAB4019040.1, TIMELESS-interacting isoform X1 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5F416TIMELESS-interacting protein OS=Gallus gallus OX=9031 GN=TIPIN PE=2 SV=1
Q3ZCC4TIMELESS-interacting protein OS=Bos taurus OX=9913 GN=TIPIN PE=2 SV=1
Q9BVW5TIMELESS-interacting protein OS=Homo sapiens OX=9606 GN=TIPIN PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006951 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07962
all species →		Swi3Replication Fork Protection Component Swi3FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012923
all species →		DomainChromosome segregation in meiosis protein 3Interproscan
IPR040038
all species →		FamilyTIPIN/Csm3/Swi3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13220
all species →		TIMELESS INTERACTING-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006974
all species →		Biological ProcessDNA damage responseInterproscan
GO:0031297
all species →		Biological Processreplication fork processingInterproscan
GO:0000076
all species →		Biological ProcessDNA replication checkpoint signalingInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0031298
all species →		Cellular Componentreplication fork protection complexInterproscan
GO:0043111
all species →		Biological Processreplication fork arrestInterproscan
GO:0048478
all species →		Biological Processobsolete replication fork protectionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10998TIPIN, CSM3, SWI3; replication fork protection complex subunit TIPIN/Csm3/Swi3-DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP