Gene detail

Detailed information of ENSAPQP00000009924.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4031329.1, Bardet-Biedl syndrome 10 homolog [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9HH21	Thermosome subunit gamma OS=Saccharolobus shibatae (strain ATCC 51178 / DSM 5389 / JCM 8931 / NBRC 15437 / B12) OX=523848 GN=thsC PE=3 SV=1
Q9V2T7	Thermosome subunit gamma OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=thsC PE=3 SV=1
P11983	T-complex protein 1 subunit alpha OS=Mus musculus OX=10090 GN=Tcp1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002319 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00118 all species →	Cpn60_TCP1	TCP-1/cpn60 chaperonin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042619 all species →	Family	Bardet-Biedl syndrome 10 protein	Interproscan
IPR002423 all species →	Family	Chaperonin Cpn60/GroEL/TCP-1 family	Interproscan
IPR017998 all species →	Family	Chaperone tailless complex polypeptide 1 (TCP-1)	Interproscan
IPR027409 all species →	Homologous_superfamily	GroEL-like apical domain superfamily	Interproscan
IPR027410 all species →	Homologous_superfamily	TCP-1-like chaperonin intermediate domain superfamily	Interproscan
IPR027413 all species →	Homologous_superfamily	GroEL-like equatorial domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14667 all species →	BARDET-BIEDL SYNDROME 10 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0051131 all species →	Biological Process	chaperone-mediated protein complex assembly	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0140662 all species →	Molecular Function	ATP-dependent protein folding chaperone	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19401	BBS10; Bardet-Biedl syndrome 10 protein	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.