Gene detail

Detailed information of ENSAPQP00000010420.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028400372.1, peroxisomal multifunctional enzyme type 2-like [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000011644

ATGGCACGATCGCTACGTTTTGACGATAAAGTTGTGCTTGTGACCGGTGCAGGAGGTGGCCTAGGTCGCGAATACGCTCTGGCCTTTGCAGCGAGGGGGGCCAAAGTCGTAGTCAACGATTTGGGGGGCAATGCGAAGGGCGAGGGTCGGAGCTCCTCTTTGGCCGACAAGGTCGTCGACGAGATTCGTTCTGCGGGTGGAACGGCTGTGGCGAACTACGAATCGGTTGAAAACGGCGAGGAATTAGTGAACCAAGTCATCAAAGCGTTCGGCCGTATCGATATTTTGGTCAATAATGCTGGAATTTTAAGAGATCGGACCTTTGGGAAAATGAGTACCTTGGACTGGGATTTAGTCCACCGGGTGCATCTCAGAGGCGCATTTCTGGTAACCAAAGCAGCGTGGCCGCACATGAAAAAGCAACGGTACGGGCGAATCATTATGACCTGCTCGACGTCTGGTGCTTTCGGCAACTACGGGCAAGCCAATTACGCTGCGGCTAAACTCGGTCTGCATGCACTCTCCCAGACCCTGGCATCAGAAGGAAAGCGCTACAACATCAAGAGCAATACAATCATCCCTGTTGCTGACTCGCGGCTAACCAAAGGAGTGATGCCCGACGAAATCAGGAAGATGGTATCGCCGAAGTTGGTCGCACCATTTTTGGTGTACCTTTGCCACGAGTCTTGCGAAGAGAATGGTGGCCTGTTTTTCATTGCTGGTGGTGCAGCCGCAGTGTTACGCTGGCAGCAATCCAAGGGTGTCAACCTCTTGTCAGATGGCCGAGACATCACTGCCGAGCTGGTACGGGATAACTGGGCACAGGTGAAGGACTGGACCAACTCTTCTTTCCCGTCAAACACAGAAGAAGCATTGGCAGCTCTGCTATCAGAAGGTGCACCATCAAGTGAAAGTGGCCCACCTGCACAAGCAAACGACAAGTTCAGTTACACCTTCAAAGAGGCGATACAGTATGCATTGGGAGTTGGTGTCTGCGTCAAGGACGATGGCTCTCATTTGAAGTTTCTGTACGAGGGCCATGAGAATTTCAGCGTCTTGCCAACTTTTGGTGTCATTCCTGCACAGGTAAAACTGAGATGTTTCATCTTTAAAGAAAAAACTGGAGTTGAAATAAACCCTGCCAAGGCATTGCATGGTGAGCAGTACTTGGAGTTGTATCGCCCGTTACAACCAAATGCAACCTTAAAGAGTGATATTGTCGTTGCCGATGTTTTGGACAAGAAATCGGGCGCTCTTATCATCGTTAATATTACCACTTCTGATGAAAAAGGCCCTCTGTGTTTCAATCAATTTGCCGTATTCTGTATTGGAAGTGGTGGTTTTGGCGGCAAAAGCCACTCAAATGAATTGAAGCCGTTGGCAGCAGCACCGCGCAGAGCCCCTGACGTCGTGGAAGTTGAAAAAACAGGGGATAGTCAGGCTGCACTTTATCGTCTTTGCGTAGACCTCAATCCTTTGCATATTGACCCAGGATTTGCTGCCATGGGAGGTTTGTTGATTCCTCTCACAACTGTAGGTTTTAAAACACCAATCCTTCACGGGCTATGTTCGATGGGTTACGCAACAAGGGCCGTGCTGAAGCACTTCTGTAACGACGACGTTCGTAAATTCAAAGCCATCAAAGTACGTTTCTCGAAACCAGTCCTCCCCGGCCAGAGCATTCGCACGGAGATGTGGAAGGATGGCAACAGAGTGCTGATGCAGTGTAAAGTTGTCGAGACAGGAGAGGTGTTGTTGTCTGGAGGCTACATTGAATTGCATGGCGATGTGGCGGCATTACCAATCCCAAGCCCGGTGCATCTTGACGCCTTATTTCAACTGATGTCGGACAATCTTCCCAACTACCCTGATTTGCCAAAGAAGATCAAGGCTTCGTTCCTGTTCCGACTGACAAAAGGCGGCAAAGTCGTCTCCGAGTGGTTGACGGACCTGACGAAGGAGCCAGGTTCGGTGACGCACGGAAAACCTTCGGGAAAGCCGAGCTGTACCATCACGATCACCGACGAAGATTTCGTTAAAACGGCGATGGGCGAGTCGAATCCTCAGGCGCTGTTTATGAAAGGAAAAGTGAAGATCTCTGGGAATATCATGTTAGCACAGAAATTACAAACTTTGTTGAAGGAATTCGATTTGAAAAAGCTACATTTCTTTGGAGCATTACAAAAGGCGGCAAAACCGCTGGCCAGTGGTTTATCGACCTCAAGACTGGCAGCGGCTCTATCATCGCGGGCGCACCGACGGGCAAGCCCGACTGCACGATAA

Transcript

ENSAPQT00000011644

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P97852	Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3
P51659	Peroxisomal multifunctional enzyme type 2 OS=Homo sapiens OX=9606 GN=HSD17B4 PE=1 SV=3
P51660	Peroxisomal multifunctional enzyme type 2 OS=Mus musculus OX=10090 GN=Hsd17b4 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005056 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00106 all species →	adh_short	short chain dehydrogenase	Domain	Interproscan
PF02036 all species →	SCP2	SCP-2 sterol transfer family	Domain	Interproscan
PF01575 all species →	MaoC_dehydratas	MaoC like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036527 all species →	Homologous_superfamily	SCP2 sterol-binding domain superfamily	Interproscan
IPR029069 all species →	Homologous_superfamily	HotDog domain superfamily	Interproscan
IPR051687 all species →	Family	Peroxisomal Beta-Oxidation Enzymes	Interproscan
IPR020904 all species →	Conserved_site	Short-chain dehydrogenase/reductase, conserved site	Interproscan
IPR002347 all species →	Family	Short-chain dehydrogenase/reductase SDR	Interproscan
IPR003033 all species →	Domain	SCP2 sterol-binding domain	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR002539 all species →	Domain	MaoC-like dehydratase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45024 all species →	DEHYDROGENASES, SHORT CHAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12405	HSD17B4; (3R)-3-hydroxyacyl-CoA dehydrogenase / 3a,7a,12a-trihydroxy-5b-cholest-24-enoyl-CoA hydratase / enoyl-CoA hydratase 2	EC:1.1.1.- EC:4.2.1.107 EC:4.2.1.119	Peroxisome	ko04146	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.