Detailed information of ENSAPQP00000010460.1 in Leptogorgia sarmentosa

Genomic Location: chr15:6692521...6697324
NR annotation: XP_028400356.1, breast carcinoma-amplified sequence 3-like isoform X3 [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9H6U6BCAS3 microtubule associated cell migration factor OS=Homo sapiens OX=9606 GN=BCAS3 PE=1 SV=3
Q8CCN5BCAS3 microtubule associated cell migration factor OS=Mus musculus OX=10090 GN=Bcas3 PE=1 SV=2
Q8SY41Breast carcinoma-amplified sequence 3 homolog OS=Drosophila melanogaster OX=7227 GN=rudhira PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008907 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21034
all species →		BCAS3_WD40BCAS3, WD40 repeatRepeatInterproscan
PF12490
all species →		BCAS3BCAS3 microtubule associated cell migration factor, C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR045142
all species →		FamilyBCAS3-likeInterproscan
IPR048382
all species →		DomainBCAS3, WD40 domainInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR022175
all species →		DomainBCAS3 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13268
all species →		BREAST CARCINOMA AMPLIFIED SEQUENCE 3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006914
all species →		Biological ProcessautophagyInterproscan
GO:0042594
all species →		Biological Processresponse to starvationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSAPQP00000010460.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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