Gene detail

Detailed information of ENSAPQP00000010504.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3996712.1, trafficking particle complex subunit 2 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B5FXJ6	Trafficking protein particle complex subunit 2-like protein OS=Taeniopygia guttata OX=59729 GN=TRAPPC2L PE=2 SV=1
A6H7F7	Trafficking protein particle complex subunit 2-like protein OS=Bos taurus OX=9913 GN=TRAPPC2L PE=2 SV=1
B2RYU6	Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus OX=10116 GN=Trappc2l PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009467 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04628 all species →	Sedlin_N	Sedlin, N-terminal conserved region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006722 all species →	Family	Trafficking protein particle complex subunit 2	Interproscan
IPR011012 all species →	Homologous_superfamily	Longin-like domain superfamily	Interproscan
IPR044760 all species →	Family	Trafficking protein particle complex subunit 2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12403 all species →	TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006888 all species →	Biological Process	endoplasmic reticulum to Golgi vesicle-mediated transport	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0030008 all species →	Cellular Component	TRAPP complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20301	TRAPPC2, TRS20; trafficking protein particle complex subunit 2	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.