Detailed information of ENSAPQP00000010507.1 in Leptogorgia sarmentosa

Genomic Location: chr15:6923081...6943658
NR annotation: CAB3994415.1, Metal-response element-binding transcription factor 2 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y483Metal-response element-binding transcription factor 2 OS=Homo sapiens OX=9606 GN=MTF2 PE=1 SV=3
Q02395Metal-response element-binding transcription factor 2 OS=Mus musculus OX=10090 GN=Mtf2 PE=1 SV=2
Q5R7T9Metal-response element-binding transcription factor 2 OS=Pongo abelii OX=9601 GN=MTF2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001530 (this species only) · gene tree & orthology
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628
all species →		PHDPHD-fingerDomainInterproscan
PF01753
all species →		zf-MYNDMYND fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR042014
all species →		DomainMTF2, PHD domain 1Interproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR002893
all species →		DomainZinc finger, MYND-typeInterproscan
IPR019786
all species →		Conserved_siteZinc finger, PHD-type, conserved siteInterproscan

 PANTHER
No PANTHER signature was recorded for ENSAPQP00000010507.1 in Leptogorgia sarmentosa.
 Gene Ontology
No Gene Ontology signature was recorded for ENSAPQP00000010507.1 in Leptogorgia sarmentosa.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06084LMO7, FBXO20; F-box protein 20-Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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