Gene detail

Detailed information of ENSAPQP00000010924.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4008605.1, N-lysine methyltransferase setd6 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000012201

GGCCGGTATTAGCTGGTCAGCAAACATTCGCAagaaatccaatatggcggattcTCCGGAGCAAAAGAGGCGAAAAGTGATAAACGACGAAACTCGAAGTttagttgaaaattttttgaaatggtGCAACGATGTTGGCCTAGTTTTAAACGATAAGGTGACGGTGAGAGAGGAAGGTTCTTGTCACAGGTTTGGAATGGTAGCGCTGGAAGACCTCGACGAAGGAGAAACCGTCTTCAAAATTCCAAGAAATGTTTTACTCGAACCAAACACGTCATCACTTTGCGAAACTGTCTCGGAATTTGCAAAAAATCTTCCAGAAATTCACACGAGGAATAAATGGTTGCCTCTTCTAGTCACGCTTCTCTTTGAGTACACGAATCCCgaatcaaaatggcggccatattTGGACCTCGTTCCAAGTGAAACTGTTCTCAACCAACCGATATTTTGGAGCGAACTGGAGAGAGAATATCTGACTCTGGTTGGGCTGAAGGATGGCGTGGAAAACGACGAAACGAATATCGAAGAAGGATACAGAGAGTTTGTGTTGCCTTTTATGGATAAGCACACGGAATTTTTCGATCCACAGATCCACACCCTGGGGTTATATAAGCGTCTGGCAGGTTTCGTCATGGCGTATAGCTTCACAGATTCTGACAAGGTCGATGCTAGGCCAGCAATGGTTCCTATGGCCGACATTTTGAATCACGTCAGCGACAATAACGCCAACCTCGAGTTTGGCGAAGAGTTTCTAAGCATGGTCACCACACAAACCGTTGCTAAGGGTGGTGAAGTGTTTAATACGTACGGCAATCTGGACAACTGTAATCTTCTGCGTTCTTATGGCTTCATCGAAGAATCTCCCAACACTTTCGATGAGGTTGAAATACCGTTGAACGTCTTCCACGATGTTCTGAACCTCACAGACGAGGAAtggaagaaaaaaatatctctgTTTCACAACCAATATACAACGGGTCACGTGAATATCAACGAAGGGATTTTGTTTAACATGGAGGCCGGGTGCTCGTGGTCGAAAGAAGCACTATACATATTTTTCCAGATTGTACACGACAAGATGGTTTCTGAAGTGACAAAATCCATGGACAATGAGAATGATAACGCAGACGTTGAAgacgaaaaaacaaaaagacaAAACAATCTACGAAAGAACAACAATGCATCGAATTCTGAGAAACGGGatacattttcaaacgatCTCTCGACAGGCCGTGGGATAACAGTTGATAACAGTGGTAGCGAAGACGAAGATGGATTGGAAAGTCATTCGGACGAACAGTCTGAGGGTGATAGCGATACAACAGCGGATGCGGATGGTTCTGATGGTGATAGAGTAGGGGATGTAGATGGATACGTGGACGACAGCGATGGATCAAGTTGTGTGAGTGGGGAGAACTGTTTGGACTGGTTTGATCTTCAAGAGTTACCCAATGAATGGAAAATGACGTTAGAAAGGGCTGCAAGTATTTGTGCAGCGAAGATATCAAACTTATCGCAGGAATTATCGAAGAAATATGACAAATCACTAGACACAAAACGAATCGCAATGGTTAAAAACATATCACAAGGCCATTTGACAATCTTAGAGAAAGTCCAAGGCCTGTTAGAATTAGAAACATAATTAACTTCGATTATGTGCTTTAGCAGATATAACTATTATTAATGTCAACGTTTGAGGCATATCGTGTATATGTATGCACGTCAACCTAAATCCTGAgcacggaaaagtactgggactagttgtcaaatagaaatccaattttcgacacaattcaaactactaaatttctcATGAAACATAATTCACTTTGTtcctaaattttcggtggactTAAAATTTCCTTTGCTAAACATGTTTAGGAAATATCAACAAGTTTAATTTAATGATGGAAAATAATAGATATGAGCAATTAAAAACAGAAAAGTGGATTTCCATTCGGCAGCCAGTTCCAGGCCCTTTGCTCACGGTCGGCTACTTGTTatatcatattattgtttttaaaaatgctaTATTGAATAAAGCTAAAACCGCAGCTAAAAATGTGTGCGGAGAGCACGAAGCATTCACTAAGAATTCATCGTAAATGACTGACTGTCTGACTAGactaattaatttaattaactcaaacatcaaagaaaaacatcACTATCACACCATAGTGTACTGCAGGCTCAATTTGCTggtggcggccattttgtatttttgtattttgtagaaaatatttttacaatccaTCTTATAACAAAGCAATCCTTTAAGAATCTTCGATTATTTTGTCCAATTCTTATTGGCATTGAAGgaaacaagatatttttcagcttattttttgtttttcacaaaataaacagaaTATAAACAACTTAAGCCACCAATTTCAAAGTGCGACAGCGACGCTTTAATGttaatttctaaattttgAAACTGGTTAATTTTGTTAGAAAACTACAATTGTGCTATAGTAGCAACCAAACCTGGCCTCATCAATTCTTTCAATAATCATTTTTCCCGGCGTTTTTTCCTTCAATTTTCGCTCTCCAAAGTACCGTAATTCTCTTTCCCGCTTTTTgagccattgtttgttttcagCTAAAAAATTACAGTAACATTTTGGATTTGCTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
C0H8I2	N-lysine methyltransferase setd6 OS=Salmo salar OX=8030 GN=setd6 PE=2 SV=1
Q803K4	N-lysine methyltransferase setd6 OS=Danio rerio OX=7955 GN=setd6 PE=2 SV=1
Q6INM2	N-lysine methyltransferase setd6 OS=Xenopus laevis OX=8355 GN=setd6 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004457 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00856 all species →	SET	SET domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044430 all species →	Domain	SETD6, SET domain	Interproscan
IPR046341 all species →	Homologous_superfamily	SET domain superfamily	Interproscan
IPR050600 all species →	Family	SETD3/SETD6 methyltransferase	Interproscan
IPR001214 all species →	Domain	SET domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13271 all species →	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016279 all species →	Molecular Function	protein-lysine N-methyltransferase activity	Interproscan
GO:0018022 all species →	Biological Process	peptidyl-lysine methylation	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0018026 all species →	Biological Process	peptidyl-lysine monomethylation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05302	SETD6; N-lysine methyltransferase SETD6	EC:2.1.1.-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.