Gene detail

Detailed information of ENSAPQP00000011140.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028394789.1, hemicentin-1-like [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000012437

ATGGCAACTTCAAGTTCCACAAGACTTTCCAGCTCTATCCTGATCCTGCCGACCACAAAGGCAACGTCGAACCCTTACTATTTAAACAATTCAACCATAACTGCTGATCAAAACATCTATCGAGGAGGAAACATAAGTTTGACCTGTCATGGAAGTGGTCACCCATATCCTCTATTCACGTGGCATTTTCGAGGACAACAACTCAGGACCAATTCTAGTGTAAGAATACTAGGAAACCAGCTGGACATTTTCAATGCTACGATGAATGATGGTGGAGAATACATTTGTAAAGCTTCCAATCTAGTCGGGAATGTTACTTCAGGGCTCGTCGTCAACGTTATGGATATTCCCTCCGTTGTATTTCGGACCGGTGCAACGAATGACACTTTAGTGGGAACAGAAATTGACATGGTGTGTTATGTTTCTCTATATTATTTCTACATTGAAAAGATGGAGTTATTAAAAGACGGCACTCTTTTTCACCAATGGATTGGAGGGTTCAATCAGTATTATTATAGTTACTACACACCAGCAAGACATAACCTCACGGGAAGGTATCAGTGCAAAGTAACTGTCGGTGCAGCATCACGTTATTCTTCTCCGTTCTATTTAACAATCAGAGATTCAAGTACTACGACAAAACCTCCGATTACTCCAGTTCCTAGAAAGATCTCCGTAACTCCGATAAATCCAACCGCTACCGAACACAGTTCTATTATTTTATCTTGCGACTGTACGTGTTCAATTCAACCGAATTGGTTTAAAAACAACCATTCTCTTCAGTACCACGCTCCTGGATCTCCATTCACTTTGTTGGCAAATGGAAGTTTGCTTATTAATGTTACCAGACACACAGCTGGGAACTACAGCTGCGAAATCAGAACGTCTTCATGGACTAAGAGATCAAGGGAAGTTAGGCTAGAAGTATGGTATTTAAACAATTCAACCATAACTGGTTCTCAATACATCTATCGAGGAGAAAACATAAGCTTGACTTGTCATGGAAATGGACACCCATATCCTCAATTTACGTGGTATTTTCAAGGACAACAACTCAGGACGAATTCTCGAATAAGAATAAGAGGAAACAAGGTGGACATTTTCAATGCTACGgtggatgatgatggagaaTACATATGTAGAGCTTCGAGCCTTGCCGGCCATGTTTCCAAAGGGCATGCTGTCACCGTTAGAGaACTTCCTTTCATTTCACTTTGGAGAAATACAACGGAGTACATTCTAGTGGAAACAGGAATTATCTTCACGTGTCACTTTTTGTCTAACGTTCCAATGAATTCAACGATGGAATTACTTAAAGACGGCCGTTCTTTTTACCAATGGATATTGCCGCGTTATTCCTggcattattattatttttcaacACCTGGGTATAGCGCAACACCACAGCACACGGGAAAATATCAGTGCAAACTAACTATCGGTGCAGCATCACGTTACTCTTCTCCGTCCTATTTAGCAGTCGGAGTTCCGTCTGGAGCTGTTGTCCTGGAAAAAGAACCAGAAACGAGTGCAACTGGAATTAGAATTTCATGGAAACCCATCTCAAAGAAGTTTTGGAATGGAGAGGAAATCACATTTCAAGTCAACGTTTCTTTACCTGATGATACTTTAAAAAGATCTTATGTAACAAAAACAACCAGTGCAATTATTTCGAACCTGCTTCCAGCTACCAGGTACATTGTCGTGATCGCAGGAAGTACAGTTTTTGGTCCAATAGAAGACCGTACCGTAACCGTGACAACGAAAGAAAATATTGATCGGTGTGAGAATGCAGATTCGAATAGCTGTCATGAATACGCACAttgcaaaaatgttgttggaaATTACATTTGTACGTGCTTCGAGGGTTTCTTTGGAGATGGCAAGGAGTGTCAAGGACCACCGCAAATCATATCGAAATCAGAGGAAAATATTGTTGAAGACGTTGAAACGAACGTGACTCTTGTCTGCACAGTGATCGCTGATCCCAATCCTACAACCATTTGGACACATATTGATGTTAAGGGCAAACCCAGGGAAATTAAACGCACTACAGACAAATTTAATGGAAACTACACAATTCATAATGCTCGAGTAGAGGACTCTGGAACATATTTGTGCAATGCATCGAATGCACTTGGCAAAGATTTCTACGCaaccaaaataaaaataaaacca

Transcript

ENSAPQT00000012437

aataattaaatatgcGAGCATTATATCATTATTCCATGTCTTTGACACCTACCGTACAATATGTGATATTGATTTTCAGTGATGGCAACTTCAAGTTCCACAAGACTTTCCAGCTCTATCCTGATCCTGCCGACCACAAAGGCAACGTCGAACCCTTACTATTTAAACAATTCAACCATAACTGCTGATCAAAACATCTATCGAGGAGGAAACATAAGTTTGACCTGTCATGGAAGTGGTCACCCATATCCTCTATTCACGTGGCATTTTCGAGGACAACAACTCAGGACCAATTCTAGTGTAAGAATACTAGGAAACCAGCTGGACATTTTCAATGCTACGATGAATGATGGTGGAGAATACATTTGTAAAGCTTCCAATCTAGTCGGGAATGTTACTTCAGGGCTCGTCGTCAACGTTATGGATATTCCCTCCGTTGTATTTCGGACCGGTGCAACGAATGACACTTTAGTGGGAACAGAAATTGACATGGTGTGTTATGTTTCTCTATATTATTTCTACATTGAAAAGATGGAGTTATTAAAAGACGGCACTCTTTTTCACCAATGGATTGGAGGGTTCAATCAGTATTATTATAGTTACTACACACCAGCAAGACATAACCTCACGGGAAGGTATCAGTGCAAAGTAACTGTCGGTGCAGCATCACGTTATTCTTCTCCGTTCTATTTAACAATCAGAGATTCAAGTACTACGACAAAACCTCCGATTACTCCAGTTCCTAGAAAGATCTCCGTAACTCCGATAAATCCAACCGCTACCGAACACAGTTCTATTATTTTATCTTGCGACTGTACGTGTTCAATTCAACCGAATTGGTTTAAAAACAACCATTCTCTTCAGTACCACGCTCCTGGATCTCCATTCACTTTGTTGGCAAATGGAAGTTTGCTTATTAATGTTACCAGACACACAGCTGGGAACTACAGCTGCGAAATCAGAACGTCTTCATGGACTAAGAGATCAAGGGAAGTTAGGCTAGAAGTATGGTATTTAAACAATTCAACCATAACTGGTTCTCAATACATCTATCGAGGAGAAAACATAAGCTTGACTTGTCATGGAAATGGACACCCATATCCTCAATTTACGTGGTATTTTCAAGGACAACAACTCAGGACGAATTCTCGAATAAGAATAAGAGGAAACAAGGTGGACATTTTCAATGCTACGgtggatgatgatggagaaTACATATGTAGAGCTTCGAGCCTTGCCGGCCATGTTTCCAAAGGGCATGCTGTCACCGTTAGAGaACTTCCTTTCATTTCACTTTGGAGAAATACAACGGAGTACATTCTAGTGGAAACAGGAATTATCTTCACGTGTCACTTTTTGTCTAACGTTCCAATGAATTCAACGATGGAATTACTTAAAGACGGCCGTTCTTTTTACCAATGGATATTGCCGCGTTATTCCTggcattattattatttttcaacACCTGGGTATAGCGCAACACCACAGCACACGGGAAAATATCAGTGCAAACTAACTATCGGTGCAGCATCACGTTACTCTTCTCCGTCCTATTTAGCAGTCGGAGTTCCGTCTGGAGCTGTTGTCCTGGAAAAAGAACCAGAAACGAGTGCAACTGGAATTAGAATTTCATGGAAACCCATCTCAAAGAAGTTTTGGAATGGAGAGGAAATCACATTTCAAGTCAACGTTTCTTTACCTGATGATACTTTAAAAAGATCTTATGTAACAAAAACAACCAGTGCAATTATTTCGAACCTGCTTCCAGCTACCAGGTACATTGTCGTGATCGCAGGAAGTACAGTTTTTGGTCCAATAGAAGACCGTACCGTAACCGTGACAACGAAAGAAAATATTGATCGGTGTGAGAATGCAGATTCGAATAGCTGTCATGAATACGCACAttgcaaaaatgttgttggaaATTACATTTGTACGTGCTTCGAGGGTTTCTTTGGAGATGGCAAGGAGTGTCAAGGACCACCGCAAATCATATCGAAATCAGAGGAAAATATTGTTGAAGACGTTGAAACGAACGTGACTCTTGTCTGCACAGTGATCGCTGATCCCAATCCTACAACCATTTGGACACATATTGATGTTAAGGGCAAACCCAGGGAAATTAAACGCACTACAGACAAATTTAATGGAAACTACACAATTCATAATGCTCGAGTAGAGGACTCTGGAACATATTTGTGCAATGCATCGAATGCACTTGGCAAAGATTTCTACGCaaccaaaataaaaataaaaccag

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A2AJ76	Hemicentin-2 OS=Mus musculus OX=10090 GN=Hmcn2 PE=1 SV=1
Q8NDA2	Hemicentin-2 OS=Homo sapiens OX=9606 GN=HMCN2 PE=1 SV=4
Q96RW7	Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001017 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679 all species →	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR013098 all species →	Domain	Immunoglobulin I-set	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR050831 all species →	Family	Carcinoembryonic antigen-related cell adhesion	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44427 all species →	CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 19	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000011140.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.