Detailed information of ENSAPQP00000011160.1 in Leptogorgia sarmentosa

Genomic Location: chr14:6904871...6907798
NR annotation: CAB4024951.1, Hypothetical predicted protein, partial [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZI22Nucleoporin NUP42 OS=Gallus gallus OX=9031 GN=NUP42 PE=2 SV=1
Q5RB98Nucleoporin NUP42 OS=Pongo abelii OX=9601 GN=NUP42 PE=2 SV=1
O15504Nucleoporin NUP42 OS=Homo sapiens OX=9606 GN=NUP42 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006595 (this species only) · gene tree & orthology

 Pfam domain
No Pfam domain signature was recorded for ENSAPQP00000011160.1 in Leptogorgia sarmentosa.
 InterPro
InterPro termTypeDescriptionSource
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan
IPR051767
all species →		FamilyNucleoporin NUP42 domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46527
all species →		NUCLEOPORIN-LIKE PROTEIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSAPQP00000011160.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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