Gene detail

Detailed information of ENSAPQP00000011324.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028410363.1, protein SHQ1 homolog, partial [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000012632

GATTGTTCACAGTCCGTCTCCCGAAGCTCGTACCAGGGACACACTTTCCTGACCTGGATCTCATAACGAAACTGCTTGCCCCGTCGGGCAAGTGCAATGTATCGAGTCCTGGGATCGAGGTTATTTCGGGAGAAGCGACGCCATGCGACGATACCGACGAAGACGGCGATTTCGACTGGGAGTGGAATCAGGAATTCTACGACGAGGAGGACGAACTAAAGGATGTCATAGAAAATCCCAATCCCGACGAACTGTCGTATTCTGAACGACGAATGGCAAGAATTGCTGccgaaaatgaaaaattcgaTGAAGAACATTATCTGGCAGATTTTTTTGAAGACGAAAGAATTAAGGAGAGTTTGAGTTATGTTGCTGACAAAGAAGtttcGTTCACTGATATTGAAAAGGAGAAACTCCGACAGCTTCCAAATCAGGAATATGTTCTTGACCATAAAGAAGAAATATCAGTTTGTTACAGTCTGGTTGATATCGTGTTCGCATTTGCTTATAACAAACGTGCAACTTTGGATGAGAATACGGTTGAATCGGCATGGACAATTTCCAAATTGAGTTCAACGTTATCTTGGTTTGAGAGATTCACAAGCTTGGAAGAAATCGTAGACGCTTGCGTTCGCCGGTCCTTGTCCTACCCGCTTTATAGACACTGGGAATTAAGCTGTAAAGTTTTGCAAGATGTTAAAGATATCTTTAAACTCGGTCGTAGAAAGATCCTGAAATGTTTACTGGAAATtttaatgttatttaatgAAAGTGAACCTCGATATCTTCTTAATGAACTTTACATCACCGATTATTGCATTTGGATTCAAAATGTTAAGGAAAGAAAAATTGAGTCGTTGGCGAAGAAATTGTTGGAGacaaaaataacaaaagagTCGATCGGTTGGGAACTAAAGGAATTAGAAACAGCCGCCATTCTTGTGTATAATGAAGAGAAAGAGCAAGACAATACCTCGGATTCCGAGTCGAGTTCGTCCGAATACTCCACGGAAGACGACGATAATGGGCCGGAAATAAGTGACGACGACTCAGATGGTGATTCTACCGAAGGAAAAGCGAATGTTGTTATGAAAAATGCTGTAATATGTTCTGAGGAAGCGGGCATGTGTGAAGATGAGTTGAAGGATAGCGATGAAGATTCAAAACACGAAACAAGGCCGCTCCATTTTGGCGTTGAAGAAAACGGGGAAGATACTGCAAATGAAAAAATTCATGAAGTAGAAGTGCTGCCATCGTTGTTGTTTGCCAAGTCGAATTTCGGCGGGAAAAGGCTAGTGGAAATGATAGGCGCTAGTGAAGACGATGATGATAAGAATTTAGATAGTGGCGAAAATGCCAACGCTTTTGAAAGCATTCGTTCCAACGCTGTTGAACCGAACGATAGCGggataagtgaaaaattgaaCGAAAGTGAACAGGAGGCCGTTTTACTCAACGAAAAGGGAAGCGAACAAGAGCTGTCTTGTAAAATATCGAGACTTGCCGTCAATGAATAACATGTGAGATTCGTTCGGTGTGTTTGATTTAGAAACTCCTGTATTCCaatagaccaaattttaaaacaatttgaaaaaggAATTCCATCTTacttcgcaaccaaactttgcagtttcaGGTTGCTCTTTCGAGCTGTGATGATAGAATTTctcatttcaaactgtttcgGAATTTGGTCTAAAGTTTAATCGAAGGTCCATCGAACAGTACCATTTCTCCTTTATATTTGGTCGATCCACatttgtataggtaatcgcatggggccgagtaaaattaaggattaatttcacgcgtgttttcaaagtttcagaaattGCCCGAGTCGCGAATCCGAAGACCGAAACCGAAGGGCCTTCCtctactaattcccgacgatggcccttcggtcgaaacgtcgaatctgttttatcgtttagctATATAGGTACTATTAGGTAGTGATATACCCATTTAAACAAACTCAAGGCTTCTTAAGATGTAGTAATCATACGTATATACCTTTACATTAAATTGCACCTATAGTTATCTTATTAAATATTACGTTCATATTATCGATTATCAGATGTACATCAATGCATGCGTTAGATTAAAATTTGTACACCTTGCCAAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6PI26	Protein SHQ1 homolog OS=Homo sapiens OX=9606 GN=SHQ1 PE=1 SV=2
Q3MHH1	Protein SHQ1 homolog OS=Bos taurus OX=9913 GN=SHQ1 PE=2 SV=1
Q05B18	Protein SHQ1 homolog OS=Xenopus tropicalis OX=8364 GN=shq1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005198 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04925 all species →	SHQ1	SHQ1 protein, Shq1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039742 all species →	Family	Protein Shq1	Interproscan
IPR007009 all species →	Domain	Shq1, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12967 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000493 all species →	Biological Process	box H/ACA snoRNP assembly	Interproscan
GO:0005654 all species →	Cellular Component	nucleoplasm	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000011324.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.