Gene detail

Detailed information of ENSAPQP00000011535.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4007913.1, zinc phosphodiesterase ELAC 2 isoform X1 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000012872

ATGctaaaaagaatttttttattgtgtcACCGTGTACATTGTGAAAACTTCTCAAAAGCATGGAATGGCAGGCATTGCCTTGGTCTCATTAAAAGATATTGCGCTATGAAGCGAAACCCATCCAGCAGTGTATGGTTACAAGTTCTTCAGTCTGGTCAAAGAGACACTTCTCCAGGTCTCTATTTGTTCACAGATGCTAATAGATACCTAATCAACACCGGGGAAAACACATTAAGGCATTTGCGTGATAGTGGATTGCCCACCAAAGGTCTGGGTACAATTTTTCTAACCGGTTCATCAATAAACCATATTGGTGGTCTTACAAACACGCTTCTAGCCAGCCAAGACAGGCCACATAATGAACGCCCTATCAATATCTATGGTCCTCCTAGCTTAGAGGCATTCTTGCAAACAATCAAGAAGTCTTTTCAATATTTGTCGAAATTTGAGTTTGTAAAGTTGAACCTCATCAACGAAAAGTTGTCGTGGCAAGAAATTTTAAACGATGAAAATTGTAGAGTATTTGCCTGTGCGATGAGCGACGGGCCCAGTGAGGTTGATAATGCGATATATCCCAGAATTGCTATATCTTATGCCTTCGTGTTTCACGAACCTTTGCGAAGAGTTTCGTTGGATGCCATGCAGAAAATAGGAGTACCTGATGATATGTTTCAGAAAGTCGTGCAGGATTGTCAAATGGGAAAAACTGTCCAGTTACCATCTGGAAAATTGATCACGCCAAACAACATTCTCCACGCTCCAGAACGCAAGCAGTCCTTCGTAATTATCGACTGCCCATCAAAGCAAGTCTTGAAAATATTAACTCAATTCAAACAAATTAACTGTCTCAGTGAAGAACTAAGCACTCTTGTTGATCTGATAATTCATATGACTCCATATGAGATTGCAACCACACGAGAATACCAGTCATGGATGAAATCAGTTGGCTGTGGAAAAACAAAGCACTTGATAATGAACAATAGAACTAACTCGAACCCTTCTCCAACAGTATTCAcgtttgataaaatttatgaCAAGTTAAGCAAGGAGCATCCACAAGCATTTCCTGCTTTACATTACTCCCCTGTAGCTACAAACGTGCTGGATTTTTTAGGTTTTCCTGGCAAAGTAACAACCACATCACCCTCTTTAAAGTATATTTTTAGACCACAAAGATTGGAAGGCTTTGATGAAAGTCCACTACGGTCGAAGATGAAAGGTTTAATAAAAACCGTAAACGATGAAACGAATAGGAAAATATTTACCAGTTCGGAACAGGATAACGATTTTGAAGTTGTTTTCCTGGGAACAGGATCAAGAGTGTCGTCCGTTTTGCGTAATACCAGCggaatcttattgcatttaAGAGATCAAAAGTCGCTGTTGATGGATTGTGGCGAAGGGACGTACAGACAGATGTGCTATCATTATGGACAGGATATAGATCTCATTTTAAAGCAACTTCGTACTGTCTTTGTTTCTCACATGCATATCGATCATCATTTGGGGTTGATTAATATTTTGCTACAACGCAAGAAGATTATGGGTGATTCTGACAGTTACGTACGTATTATTGGGCCTGAAAGCTTGGACCTATACCTGAGATATTTTGAAATGCTGAGTGGAGAAACGCTTAATTTCAGATTTACTCAGTTTTGGTGGGTGAAACGAGGCAGTGGAAAAAAGGAGGGAAGAACATTCAGCCGTTCACTCGGCCTTTCAGCGATTTCTGTCGTTCCTACTAAACACAGCGATTATTCCCATGGCTTGGTTGTTGAACGCAATGGCTGGAAGATTGTGTACTCAGCAGACACAAGACCTTGTAAACAGTTGATTGATGCTGGACAAAATGCAACATTGCTCATTCATGAGGCTACATTTGAAGATCAGCTTTTAAACAGAGCAAAATTAACTAGTCATTGTACGGTAtcggaagccattaaatgcaGTGAGCTAATGAAAGCTGAACATACGATACTAACGCACATCAGCAGCAGGCATTTGTTTCCATGCAAATCCTCTCGCCTTCCTGACCGAGTTAGTTTTGCCTTTGATCACTTGACGGTTCAACAAAAGGACCTAAGCATGTTGGAGAGGATTATGCCGAGTGTTGAGCAGACAATCCTTCAAACTCAACAAGGCAAACGGTCACGAAGAAAACGAAAGTGA

Transcript

ENSAPQT00000012872

CATACCTGTGGTTTGAAATGctaaaaagaatttttttattgtgtcACCGTGTACATTGTGAAAACTTCTCAAAAGCATGGAATGGCAGGCATTGCCTTGGTCTCATTAAAAGATATTGCGCTATGAAGCGAAACCCATCCAGCAGTGTATGGTTACAAGTTCTTCAGTCTGGTCAAAGAGACACTTCTCCAGGTCTCTATTTGTTCACAGATGCTAATAGATACCTAATCAACACCGGGGAAAACACATTAAGGCATTTGCGTGATAGTGGATTGCCCACCAAAGGTCTGGGTACAATTTTTCTAACCGGTTCATCAATAAACCATATTGGTGGTCTTACAAACACGCTTCTAGCCAGCCAAGACAGGCCACATAATGAACGCCCTATCAATATCTATGGTCCTCCTAGCTTAGAGGCATTCTTGCAAACAATCAAGAAGTCTTTTCAATATTTGTCGAAATTTGAGTTTGTAAAGTTGAACCTCATCAACGAAAAGTTGTCGTGGCAAGAAATTTTAAACGATGAAAATTGTAGAGTATTTGCCTGTGCGATGAGCGACGGGCCCAGTGAGGTTGATAATGCGATATATCCCAGAATTGCTATATCTTATGCCTTCGTGTTTCACGAACCTTTGCGAAGAGTTTCGTTGGATGCCATGCAGAAAATAGGAGTACCTGATGATATGTTTCAGAAAGTCGTGCAGGATTGTCAAATGGGAAAAACTGTCCAGTTACCATCTGGAAAATTGATCACGCCAAACAACATTCTCCACGCTCCAGAACGCAAGCAGTCCTTCGTAATTATCGACTGCCCATCAAAGCAAGTCTTGAAAATATTAACTCAATTCAAACAAATTAACTGTCTCAGTGAAGAACTAAGCACTCTTGTTGATCTGATAATTCATATGACTCCATATGAGATTGCAACCACACGAGAATACCAGTCATGGATGAAATCAGTTGGCTGTGGAAAAACAAAGCACTTGATAATGAACAATAGAACTAACTCGAACCCTTCTCCAACAGTATTCAcgtttgataaaatttatgaCAAGTTAAGCAAGGAGCATCCACAAGCATTTCCTGCTTTACATTACTCCCCTGTAGCTACAAACGTGCTGGATTTTTTAGGTTTTCCTGGCAAAGTAACAACCACATCACCCTCTTTAAAGTATATTTTTAGACCACAAAGATTGGAAGGCTTTGATGAAAGTCCACTACGGTCGAAGATGAAAGGTTTAATAAAAACCGTAAACGATGAAACGAATAGGAAAATATTTACCAGTTCGGAACAGGATAACGATTTTGAAGTTGTTTTCCTGGGAACAGGATCAAGAGTGTCGTCCGTTTTGCGTAATACCAGCggaatcttattgcatttaAGAGATCAAAAGTCGCTGTTGATGGATTGTGGCGAAGGGACGTACAGACAGATGTGCTATCATTATGGACAGGATATAGATCTCATTTTAAAGCAACTTCGTACTGTCTTTGTTTCTCACATGCATATCGATCATCATTTGGGGTTGATTAATATTTTGCTACAACGCAAGAAGATTATGGGTGATTCTGACAGTTACGTACGTATTATTGGGCCTGAAAGCTTGGACCTATACCTGAGATATTTTGAAATGCTGAGTGGAGAAACGCTTAATTTCAGATTTACTCAGTTTTGGTGGGTGAAACGAGGCAGTGGAAAAAAGGAGGGAAGAACATTCAGCCGTTCACTCGGCCTTTCAGCGATTTCTGTCGTTCCTACTAAACACAGCGATTATTCCCATGGCTTGGTTGTTGAACGCAATGGCTGGAAGATTGTGTACTCAGCAGACACAAGACCTTGTAAACAGTTGATTGATGCTGGACAAAATGCAACATTGCTCATTCATGAGGCTACATTTGAAGATCAGCTTTTAAACAGAGCAAAATTAACTAGTCATTGTACGGTAtcggaagccattaaatgcaGTGAGCTAATGAAAGCTGAACATACGATACTAACGCACATCAGCAGCAGGCATTTGTTTCCATGCAAATCCTCTCGCCTTCCTGACCGAGTTAGTTTTGCCTTTGATCACTTGACGGTTCAACAAAAGGACCTAAGCATGTTGGAGAGGATTATGCCGAGTGTTGAGCAGACAATCCTTCAAACTCAACAAGGCAAACGGTCACGAAGAAAACGAAAGTGAAAGTGGTCAAGCAATGTACAAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8MKW7	Ribonuclease Z, mitochondrial OS=Drosophila melanogaster OX=7227 GN=RNaseZ PE=2 SV=2
Q80Y81	Zinc phosphodiesterase ELAC protein 2 OS=Mus musculus OX=10090 GN=Elac2 PE=1 SV=1
Q8HY87	Zinc phosphodiesterase ELAC protein 2 OS=Macaca fascicularis OX=9541 GN=ELAC2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002053 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12706 all species →	Lactamase_B_2	Beta-lactamase superfamily domain	Domain	Interproscan
PF13691 all species →	Lactamase_B_4	tRNase Z endonuclease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036866 all species →	Homologous_superfamily	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Interproscan
IPR001279 all species →	Domain	Metallo-beta-lactamase	Interproscan
IPR047151 all species →	Family	Zinc phosphodiesterase ELAC protein 2-like	Interproscan
IPR027794 all species →	Domain	tRNase Z endonuclease	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12553 all species →	ZINC PHOSPHODIESTERASE ELAC PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0042781 all species →	Molecular Function	3'-tRNA processing endoribonuclease activity	Interproscan
GO:0072684 all species →	Biological Process	obsolete mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	Interproscan
GO:0008033 all species →	Biological Process	tRNA processing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000011535.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.