Gene detail

Detailed information of ENSAPQP00000011576.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028400378.1, protein spinster homolog 3-like [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000012920

gaatattagcaagagcaaaaaaccaactcgaaaaccgagTGTCAACATTTTCAACGATGTATTGGTTGTCTCGCGTGGAGCCCACGCAGGAGCCATGTTGGAATGAAGAAGGAAACATttacataaaaaataaaaaacaacaagttTTAAATGCCGTCGCCTTCTCCATCTTCAACCATGCCTCGTGTTTCAAGACGTCGTGCTTATGTAACTGTggccattttatttttcatcaatttATTGAATTACATGGATCGTTTCACTGTTGCAGGTGTTTTACAAAGGATTGAACATTACTTCGGAATAGATCATGGTAAAGCTGGATTGCTACAAACTGTGTTTATTGTGAGCTATATGATACTGGCTCCAATATTTGGTTATCTTGGTGACAGATATAGCCGCAagattattatgattattgGTCTCACTATTTGGTCATTAACAACATTTTGTAGCACACTTGTAAACAGCAAACAATTCTGGCTTTTCTTTGCCTGTCGAGGGTTCGTAGGGATTGGTGAGGCAAGTTATTCCACTGTAGCATCAACTGTGATTGGTGATCTTTTTGTTGATGACAAGAGAACACAAATGCTggcaatattttattttgctatTCCAGTTGGAAGTGGTCTTGGGTATGTTGTTGGATCAAAAGTGTCATCAGCTTTTGGTGGTGATTGGCGGTGGGGACTGAGGgtgACTCCAATGTTGGGCTTGTTGCTGATCATTTTATGTGTTTTATTTGTTGTTGAGCCTGTACGAGGCCAGATTGAAAGAAGTCATGGTGATAATGAAGTAGTTGCTGATGAAGGAGTTGTTGTTCGTCATTCTTGGCTTAATGATATCAAACGTATCCTACGATGcaAGACATATGTGTGGAGTAGCATTGGTTTTATGTTGATGTGTTTTGTGACTGGTGCTTTGGCCTGGTGGGCTCCTGAGTTTATTGCTGATTCACAATCTGTTTATTATGGCAGAAATATTACAGAGAATGACAACAACATAAGTCTTGTGTTTGGTGGAATTGCATGTGCAGCAGGATTTATTGGTGTTGCTTTAGGAGCTGAGTTGTCACGTAGATATAGGTCACGTTATGGTCATTCTGATGCCTTAGTTTGTGCATTCGGTCTTTTGGGCAGTATACCTTTTCTATTTCTCACCTTGATCTGGGCTTCCAAATATATCTATCTGTCATATatACTTTTGTTTTTTGGAGACACATTGTTATTCATGGTTTGGTGTCCTGTAGCAGACATATTATTAGCAGTTGTACCTCCTCAGTATCGAGCTACAGCATCAGCTTTTCAAATCTTACTTTCACATTTATTTGGAGATGCAGGCAGCCCTTATATTGTGGGATTGGTGGCTGACAGCATCGAAGGATCAGGATCTGATAAAGCCAAACAACGAGCACTtctttattcattttttatgaTGCCTTTTATAACTGCTTTGGCAGGAgcatgttttttaatttcttcattCTATTTAATCAAAGACAGAGCTGCTGTCAAAGCAACAGTCACTGGTCACACTGATGAAAATAGAACCCTCCTCAATCATGGAGATTATGACGAGGACAGCACCACTGATAATGATGTCAGCAATGATGTACTAAATGGTCATGTCAAAAACAGTGATGAAGCAAATGATATCGTTATCAGAATCTGTTGTGTATTATCATGTAGTAGAATTTTGGATAGTTTTGCAGTGAATAAATCAACCTTCCTTTGGATAACAAGTTAGTAAGATGAAGACTATTCAAAGGACAGGTACCCatagaaaatgtttgttaGCTTTTAACAAGTTTAGCAAGTACATTCACAGGTATTGAAACTAGACTTTTATTGGTACAAGACAATTCTACATCTGATCATACATCAAGACATAAAAAACAAGTTAGATTGATTGTATTTCAGGTCTTTTGTTCCTTGTTTACAAGGGGTACATAGCGAACACCCATGAGACGTTTGCGTGTAGTGCTACCATCTTGTTGTTTATCAATCTGTTCAAGGTATTGTTCCCCATGTTCTGCCCCTACTGGTATAAACAATCTGCCTCCTGGTTTTAGTTGCTCAACCAGTGCTTGTGGTACACTTGCAGCTGCAGCCCCCACATGAATTGCATCAAATGGAGCCTCTAAAATAACCGTTTATCAATAaacataattttttcaataGTTTCAGCAGTTTTAAGCTGACAGCCAGAATACTTACCATCAGCATAACCATCCCAGCCATCACCAAACAACAGTTTAACTCGACCATCATCCAACAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5XGK0	Protein spinster homolog 1 OS=Xenopus laevis OX=8355 GN=spns1 PE=2 SV=1
Q2YDU8	Protein spinster homolog 1 OS=Rattus norvegicus OX=10116 GN=Spns1 PE=2 SV=2
Q8R0G7	Protein spinster homolog 1 OS=Mus musculus OX=10090 GN=Spns1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004280 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690 all species →	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011701 all species →	Family	Major facilitator superfamily	Interproscan
IPR044770 all species →	Family	Protein spinster-like	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR020846 all species →	Domain	Major facilitator superfamily domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23505 all species →	SPINSTER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005215 all species →	Molecular Function	transporter activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23677	SPNS; MFS transporter, Spinster family, sphingosine-1-phosphate transporter	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.