Gene detail

Detailed information of ENSAPQP00000011708.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028396822.1, ataxin-2-like protein [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000013064

ATGAATTATAGCTCGACTAGCCTTAAGATGAAGCGGGTAGGGACTAGTCGTAACAATCCTAGCAGAGGGAGAATCAAACCTTCTAATGCAGGAAACCAAGCAAGCCAGAGCTTGGAAGGGTTGTATTCAAATGATAGACTTGTGAATGTGGTCACTTCAGTTCTGGGATGTACTGCAAAAGTGATGGGGGAAAATGGAAAACAGTTTGAAGGGGTCTTCAAAACAATTTCCCCTGAGGCGAGTTTAGTTCTTGGTAAAGCCAGCCAAGTTGAAGAGCAAGTGCAAAATGGAGTTGTTGATGGCATGTCAAAGAAACcagaaatgtttgaacaatttgTTATGCATCAAAAAGACTGGGTCAGAGTTGAGTTTAAGGATGTGAATTTGGAAGAATGTTGCAATAAAAAAGAATTTAAAACAGATGTAGCCATTGGGGGTAGTAAAAGAATGAATGGACAACGAGGGAAAGAGCTTGAAAAATGGGAGCCAGGAGATATTAGTGACCTGTTGGAAAGTACTGGCTTAGATGGACAGCATAATATGGAGAATGGATGGAGTGCagagaaaatgtttgaaacaaatgaacaaaGGTATGGAGTAAAGTCAACATATAATGAAACAATGGAAGAATACACGACAAAACTTGAGAAAGCTGACACACCTGAATTCAGAGAGAGAGAAAGGTTTGCTGCACAAATAGCTGAAACAATATCTAGGGAAAGTCCATTTGAACATAGTACATTTGATAGTGGTAGATCTGAAGAACAGCTGTACAGTGCTGTTGTACGAAACAGATCATCAGCACTCAACTGGAGACAATCTAACAGTGACCGACCCTCTGAAAGAGATCAGAGAACAGTGAGAATGCCATATCAAAGTATTGGATTGCCTGGATCTGCCAGAAGGGAACCAGTGAAAAGTCAACAAATTGCTGACCCAACCAAAGTGCAGGTCAAAGAGAAAGTTGAGAAGCCAACAACAGGAACAGCTGTTGAATGTAGACCTGAACAGAAACTTGGAGCATTGAGCGAAATAGTAAAAGCTGAGCCCAAAACTGGCCCGAATGTCAGTGAAGCAAAACCCCTTGTTACGCCAACCAACTCATCTGTTGCCCCTCAGATGTCAGTCTCCAAAGAACCTTCCCCAGATCTTGTCAGCAATCCAGATGTAGCCATACCTGAAACAAGAAGTAAAGAATTCAAAGACCTCAGAGATTTCTCCGTTAACTTCCAGcttccagaaaaagaaaagaaatcacCAAAGGTGAAAAAAGTTACAGAAGAGGAAGAAAAGACTTCAAATGAAGCAACAAATAAAGAAGAGAAGGATGAAGAAGTACAAACATGTGAAGAAATGAAAGCTGATTTGGAATCCAATGAGAAGAAAGCAAAATCAGAACTCAATCCAAATGCCCAAGAATTTCGCCCCAGGACAAAACGTAATACACCAAGTCCTAGATCAAACAGTACGGCATCAAGCAGTGGAGCTCCATCACCCTATCCAAACAACTCTCCCTTTTCACCATATCCCCCCAATGGTATTTACTCAAGAAATGGACCCAGGGGCAGAGGTATAAGACAAGAGTACATGGAGCCAACACCAGGTTACATCAACGCTTCCAGTGCTGCTGGCGCCCCTTTCTTTGCTCATCATATGCCCCCTCAGTTTATGCATCAGCCCTCCCCTCCTGGAATGTCTTATGGCATACGTCATCCAGGGATACAACACCAACTTTTTATACAACAGCACCCTCATCAAGGACCAATGATGCTCCCTGTAGGACAGATGCCACCTGGTCATTATGCTGACAATGCCATCTATTACGGTCCTGCTATGCCAACAATGGTACAAAGTCCTCCGCAGATCACCTCACCGTCGTTACAACAATCGCAGTTCAACTTCCCTCCTCCCGCTATCCCACAACCTGTAAACCAAGTGCGTCCTGTGTCACAACCCCCTGCTGTTATACCACAGCAGCCACCTGCCCCCATATTTATACAACCAACACAAATAATGACAGCCAATAGGCCACCACCCCAGCCATTCCAAGGAAATTGA

Transcript

ENSAPQT00000013064

AAAGGCCGAAATTATGGCCGAGAAAAGAGCTTAATGGCCGGTCATCGAAGAACAAAGACGAAACAAGAGTTTATCAATGAATTATAGCTCGACTAGCCTTAAGATGAAGCGGGTAGGGACTAGTCGTAACAATCCTAGCAGAGGGAGAATCAAACCTTCTAATGCAGGAAACCAAGCAAGCCAGAGCTTGGAAGGGTTGTATTCAAATGATAGACTTGTGAATGTGGTCACTTCAGTTCTGGGATGTACTGCAAAAGTGATGGGGGAAAATGGAAAACAGTTTGAAGGGGTCTTCAAAACAATTTCCCCTGAGGCGAGTTTAGTTCTTGGTAAAGCCAGCCAAGTTGAAGAGCAAGTGCAAAATGGAGTTGTTGATGGCATGTCAAAGAAACcagaaatgtttgaacaatttgTTATGCATCAAAAAGACTGGGTCAGAGTTGAGTTTAAGGATGTGAATTTGGAAGAATGTTGCAATAAAAAAGAATTTAAAACAGATGTAGCCATTGGGGGTAGTAAAAGAATGAATGGACAACGAGGGAAAGAGCTTGAAAAATGGGAGCCAGGAGATATTAGTGACCTGTTGGAAAGTACTGGCTTAGATGGACAGCATAATATGGAGAATGGATGGAGTGCagagaaaatgtttgaaacaaatgaacaaaGGTATGGAGTAAAGTCAACATATAATGAAACAATGGAAGAATACACGACAAAACTTGAGAAAGCTGACACACCTGAATTCAGAGAGAGAGAAAGGTTTGCTGCACAAATAGCTGAAACAATATCTAGGGAAAGTCCATTTGAACATAGTACATTTGATAGTGGTAGATCTGAAGAACAGCTGTACAGTGCTGTTGTACGAAACAGATCATCAGCACTCAACTGGAGACAATCTAACAGTGACCGACCCTCTGAAAGAGATCAGAGAACAGTGAGAATGCCATATCAAAGTATTGGATTGCCTGGATCTGCCAGAAGGGAACCAGTGAAAAGTCAACAAATTGCTGACCCAACCAAAGTGCAGGTCAAAGAGAAAGTTGAGAAGCCAACAACAGGAACAGCTGTTGAATGTAGACCTGAACAGAAACTTGGAGCATTGAGCGAAATAGTAAAAGCTGAGCCCAAAACTGGCCCGAATGTCAGTGAAGCAAAACCCCTTGTTACGCCAACCAACTCATCTGTTGCCCCTCAGATGTCAGTCTCCAAAGAACCTTCCCCAGATCTTGTCAGCAATCCAGATGTAGCCATACCTGAAACAAGAAGTAAAGAATTCAAAGACCTCAGAGATTTCTCCGTTAACTTCCAGcttccagaaaaagaaaagaaatcacCAAAGGTGAAAAAAGTTACAGAAGAGGAAGAAAAGACTTCAAATGAAGCAACAAATAAAGAAGAGAAGGATGAAGAAGTACAAACATGTGAAGAAATGAAAGCTGATTTGGAATCCAATGAGAAGAAAGCAAAATCAGAACTCAATCCAAATGCCCAAGAATTTCGCCCCAGGACAAAACGTAATACACCAAGTCCTAGATCAAACAGTACGGCATCAAGCAGTGGAGCTCCATCACCCTATCCAAACAACTCTCCCTTTTCACCATATCCCCCCAATGGTATTTACTCAAGAAATGGACCCAGGGGCAGAGGTATAAGACAAGAGTACATGGAGCCAACACCAGGTTACATCAACGCTTCCAGTGCTGCTGGCGCCCCTTTCTTTGCTCATCATATGCCCCCTCAGTTTATGCATCAGCCCTCCCCTCCTGGAATGTCTTATGGCATACGTCATCCAGGGATACAACACCAACTTTTTATACAACAGCACCCTCATCAAGGACCAATGATGCTCCCTGTAGGACAGATGCCACCTGGTCATTATGCTGACAATGCCATCTATTACGGTCCTGCTATGCCAACAATGGTACAAAGTCCTCCGCAGATCACCTCACCGTCGTTACAACAATCGCAGTTCAACTTCCCTCCTCCCGCTATCCCACAACCTGTAAACCAAGTGCGTCCTGTGTCACAACCCCCTGCTGTTATACCACAGCAGCCACCTGCCCCCATATTTATACAACCAACACAAATAATGACAGCCAATAGGCCACCACCCCAGCCATTCCAAGGAAATTGAGCTGTTTTCCACAAAGTAAGTTTTT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004007 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14438 all species →	SM-ATX	Ataxin 2 SM domain	Domain	Interproscan
PF06741 all species →	LsmAD	LsmAD domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009604 all species →	Domain	LsmAD domain	Interproscan
IPR025852 all species →	Domain	Ataxin 2, SM domain	Interproscan
IPR045117 all species →	Family	Ataxin2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12854 all species →	ATAXIN 2-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0010494 all species →	Cellular Component	cytoplasmic stress granule	Interproscan
GO:0034063 all species →	Biological Process	stress granule assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000011708.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.