Detailed information of ENSAPQP00000012049.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3992917.1, Hypothetical predicted protein [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P07746High mobility group-T protein OS=Oncorhynchus mykiss OX=8022 PE=2 SV=2
P12682High mobility group protein B1 OS=Sus scrofa OX=9823 GN=HMGB1 PE=1 SV=3
Q9YH06High mobility group protein B1 OS=Gallus gallus OX=9031 GN=HMGB1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008289 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505
all species →
HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036910
all species →
Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR009071
all species →
DomainHigh mobility group box domainInterproscan
IPR051965
all species →
FamilyChromatin Regulation and Neuronal Gene ExpressionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46040
all species →
HIGH MOBILITY GROUP PROTEIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0010468
all species →
Biological Processregulation of gene expressionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSAPQP00000012049.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP