Detailed information of ENSAPQP00000012265.1 in Leptogorgia sarmentosa

Genomic Location: chr16:5753605...5767862
NR annotation: XP_028406945.1, spatacsin-like [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3UHA3Spatacsin OS=Mus musculus OX=10090 GN=Spg11 PE=1 SV=3
Q96JI7Spatacsin OS=Homo sapiens OX=9606 GN=SPG11 PE=1 SV=3
Q55GD2Protein DDB_G0268328 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0268328 PE=4 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002279 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14649
all species →
Spatacsin_CSpatacsin C-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR028103
all species →
FamilySpatacsinInterproscan
IPR028107
all species →
DomainSpatacsin, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13650
all species →
UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K19026SPG11; spatacsin-DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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