Gene detail

Detailed information of ENSAPQP00000012646.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3990855.1, ---NA--- [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000014063

AAAAAACCCAACAACGTGACTGCAGACAATTGGAAAATGTTGCCTGAATATCGTATTACGTTGATTCTTATCAAATCGATTTGTACTTTGTTGGGTACTTCAGGCAATTTACTTGTCATCATTCACAATGTCTTCATGCGCTACGAGAAGAATCCAGCGACCATTTTCACCACAAATTTGGCAATATCCGACTTACTGACTTGCCTCACAATGTATCCAATGAGGATTGCCAGATCAACGATGATTCTCAATGGTTTTCAATTTGAGTCAAATAGTTTATTCCTGTGCAAAGCTAGCTACTTCAGCGCCGGTGTTTCAGTTTCACTCTCCATTCTAACTTTACTTGTCGTCACTTACGATCGATATTTGTTCATAAAGAAACCGTTACGGTACCCACTTCTTATGACCCAACCCAAAGTCTGTGGAATCCTCATCGCCATTTGGGTCACATCATTAGTGATTTATTTACCACTGACTGTTGCATTCGTTGAAACGTCAGAAGAGACCAGACGTGGGTGCTTTTTAATACTCAACAGTTTATcagttatattttttttctacaaTTACCTTCCCATCCTCCTCATCTTATGGTTCAACTTGAAAACGTTACGTATAGCGCAAACACAAAGACGCTCCCTGACTCGAAATGCTGTCCGGGACCCAAGCACAACAAATATGGGCATTAGAACAAGAATTGGCAAAGAACTCAAAGCTATCAGAACGTTTGCAGTAATAATGGGACTCTTAGTGACTTGTTACACTCCTTATGCATTAATAATGCTTTTTCATTTGGCCGATTATCACCCGGGCATACCACCTATTTGGGAGGACATTTTCACGGATTTAGTTGGGATAAATTCAGTGTTCAATCCggtaatatactGTAACCAAACGTTGCACGGTAATCTAGCAGAGACCGCTGTCCAGGTTTCTGATTCTCTGAGAGAGAACTATCATGACGTCACAAGAATGGAGCCACACCTGGCAAGCTCGATGATCGTCGCGTTACGATTGGCTGGCCATCTACCGCACACCATTATGAAAGATTTCAAAGTTGACAATGCCCACACAATCCTCGATTACCTCAAATCCCATTTAGATCTTCACAAAACCTCGCCACATTTACGTCCTGGCCATATTGCAAGTATATTTCAAGCAGTTTCAGCATTGTGCTATGACCCGCAGAATTTCTTCAGCCATAATATAAAAGACGCACTTTTGAATGTTTTGCCTTCGTTCCAACATTCCACGTGTAGGAATTCTTTTGAATACAGTTTGGTAGCTTTAGGTGTTTGTCAAAGTTTAGGCACAAACATTGAACCACTTTTGGTGAGGGAAATACAACTCGAGATTAACCAAGGTTGCACCACAAAAACCTGCATGAAGCAGCCAGATACGACAGCAATGGCAATCATAGCTCTGTCTTGTCTGAGACGAAATATCGCAGGAAGAGACGTTGATGTATTAGTGGATGTGGAGAAGACAATTAAAAGATTTTTACAAGTCGTCAACAACGCGTTACATAAGCGTAAAGATCTTTCCTGGAACGCGCAGTCAAAAGGACTACTTGTGCAGGTAAAGCTGGTTTGGCGAttcttttcgcgcgaacaagaaactgcatgtgattggctggtgatatCGTCAGTAGCCAGTCAAGCGATCATGTCGTTACCAAAAGACCTGAGGCCAACACGCTGGCAATGTAACCGACTGCTGTCTACCATATTGAAAAAACACGATCCATTGAAAGGGTTTGGAAATGTACTGGCCGATATTCAAATATTGCCTGCGCTACTGGGACGATCATTGCTTGATCTTAAGATGTCCTGTCCAAAACACACACCAGCATGTGTGAAATTAGTTGTTGAAGACCAGAAGCAGAATCAGAATATTCCAGAAAAGGTCTTGCTTCTGGTGCCAGAGAATGCGACAGCTTACGAGATTCTGAAGCAAGCTGCAGACAGCGACGCCTCTTATAAATTTGAAGAGTTGACAACAACGTACGGCCGCATGATTACAGAAATCGCAGGTGTACAACAGAACCACGAAACAGGATACTACTGGTCATTGTATGAAAGTGACAACGTCCTTGCACAGAATGGAGTTGATTTACTTATACCAAAGAATGATGCTtgtattattttcaaataCGAACGCTGTGCTGTGGAAAGCAGTGTTGTTGATGAACCCAGTGGTGGAGGTAGTTTTGTTTGA

Transcript

ENSAPQT00000014063

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9WU25	Alpha-1A adrenergic receptor OS=Cavia porcellus OX=10141 GN=ADRA1A PE=2 SV=2
Q91175	Alpha-1A adrenergic receptor OS=Oryzias latipes OX=8090 GN=adra1a PE=3 SV=1
O02824	Alpha-1A adrenergic receptor OS=Oryctolagus cuniculus OX=9986 GN=ADRA1A PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001572 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14478 all species →	DUF4430	Domain of unknown function (DUF4430)	Domain	Interproscan
PF01122 all species →	Cobalamin_bind	Eukaryotic cobalamin-binding protein	Repeat	Interproscan
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR051588 all species →	Family	Eukaryotic Cobalamin Transport	Interproscan
IPR027954 all species →	Domain	Transcobalamin-like, C-terminal domain	Interproscan
IPR002157 all species →	Family	Cobalamin (vitamin B12)-binding protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10559 all species →	TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0015889 all species →	Biological Process	cobalamin transport	Interproscan
GO:0031419 all species →	Molecular Function	cobalamin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000012646.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.