Gene detail

Detailed information of ENSAPQP00000012886.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4002320.1, eukaryotic translation initiation factor 3 subunit L-like [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000014351

GAGTTGTACTTTAATGTACACATTTATCGCGGAGTGATATCCTTATGTGTACCCTATTGTACCCAATTGTAACCATATGTTATTACGGAGTCCATTAATGTACCTTAATGTACTACTTTTCTGCCATTCTTCCCCTATTGTACCCATATGTTATAGGGAGTCCATTAATGTACCGTGATGTACTACACTGCCATTCTTCCAAAGCGTGAAtaaactttatatatttttaattttcacgTGTTATAAAAGTCTATAAAAGAgaacaagaaattttaaacactgtGTGAAGACACTGGAAAATGTACACTCAAGCTGAGGAATTTGTTGAGGCAGAGTTGGAGTCTGGTGCAATTGCTGGAGGTTATGGATATCCTGGTGATGATTATGACTCACAATATCACGATGCAGATCTGAGTCAAGATTCACATAGTGATAATGGAGCATATCTGACGGAGGAAgttaaaaatttcataaagtattttcaaaagCATATCCATGGACAGAATGTAAGAGAAATCCATTCCATGTATGAAAGTGGATTTACAAGGCTTAGTGATGAAAAATTTCCAAAGGCACCATGGCCTGAGGCAGAGCAGCTCTCATCCCTTGTCGGGAATGaTCCACTTTTCCTGACCCTTTATAAGGAGTTGTGCTTTAGGCATATTTACTCCAAGTTAAAGCCCACAATCGAGCAAAGGATTGATTCTTATTATAACTATTGTGATCTTTTTAACTACATACTAAacACAGATGAACCAGTTCCTCTTGTCTTACCCAACCAATGGCTTTGGGATATCATTGATGAATTTATATACCAAtttcaatCATTCAGTTTGTTCAGGAACAAGTTTGGTAAATTGAGCCCAGATCAAGTTATGGTGCTAAGAGAAAATCCAAAGATCTGGAATGTGCATAGTGTCTTGAATGTTCTTCACTCTCTTGTTGACAAGTCAAAGATTTATGAACAGTTGGAGGAATATCGCACTGGTGGTGATCCTGACACAGTTGCCGGGGTGTTTGGTGTTCGACCATTGTACAAAATGTTGGGATACTTCAGTCTTATTGGTTTACTGCGACTGCATTCATTGCTTGGTGATTATTCCATGGCACTGAAAGTTCTTGGAAATATCGAACTTAATCGCAAGAGTATGTACTCACGAGTTCCAGCCTGTCAAATCACCACATATTATTATGTGGGTTTTGCATATCTTATGATGAGGCGATACCAAGATGCCATTCGAAGTTTCTGTAATATTCTGTTGTACATCCAGCGTGCTAAACCAATGATTCAGAATCGAGCTTATCAAATTGACGCTatcaagaaaatgaatgataaAATGTACACATTGCTTGCTGTTTGTTTGTCTCTCTCGCCCCAGCGCATTGATGAGAACGTGAACGCACATCTTCGTGAAACATACAGTGAGAAAATGATTAAACTTCAAAGAGGAGACCTAAGTTTACTTGaggaaatgttttcatttgctTGTCCAAAGTTTGTAACTCCTTCAGCACCCAACTATGATGCAGCACCAGGAAAATATCACCGGGAGGCTTTCGATATCcaattgaagaattttctgCAGGAAATGAGACAGCAGTCATTGATTCCTATCATAAGAAGTTATCTCAAGTTATATACAACAATGCCAATACCAAAATTAGCTGCGTTTCTTGATATGGATGAGGAAACTCTTCGGACTCAATTGCTGTGCTACAAGCATAAACAACGTCATCTCACATGGACAAAAGGCCCAGATGCTTTAGAAGGAGAATTTCAGTCATCTTCTGATGTGGACTTCTACATCGAGAATGACATGATTCATATTGCAGACACCAAAGTCGAACGAGGATATGGGAATTTCTTTATTCGACAAATCATAAAATTCGAAGAGCTTGGTCAAACTGTTAATACTGAACGCTACTGATGCAAATGGTGTTTCCTGTCCTTGAATATGTACTGatgtaaaataaataatcataTACATTAAAATGTTGTCTGTTGTCATATTTTGTATTAGATTAATTCTCATTGCCCTACTCAGctgaattttagataatatacattgtctgaaacgataaaatcaatcctggagtctattggactttgaattgaacataaaatcacagaaatggttgctttttaaagcctttttacaaacctttctcgagcagtcaaacaacaaggaaaatgattgacactcggttttcgagttggttttttgctcttgctaatattcctaaaacataaaaaataagatacatttatcaaccaacatgacaaatatacaaataaataaaaataaaaggcctggcgtaaaaaataaatatttaaaaatccatcaaatttgaggcattttacggtgttttgaaaaatgttttgttacatttgttctatttttgttgggtaagaccgctgaacttcttaaaataccgacggaacaggtctgaaaatacccccattatcccttggagtccttaattatatctctgtagcaaccataatctattggtaaccactattatcccattgtgtacaaatattatcccctcacatacatgattatcatgtattattcaaattta

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7SDW5	Eukaryotic translation initiation factor 3 subunit L OS=Nematostella vectensis OX=45351 GN=v1g169424 PE=3 SV=1
Q7T2A5	Eukaryotic translation initiation factor 3 subunit L OS=Danio rerio OX=7955 GN=eif3l PE=2 SV=1
Q3ZCK1	Eukaryotic translation initiation factor 3 subunit L OS=Bos taurus OX=9913 GN=EIF3L PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005683 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10255 all species →	Paf67	RNA polymerase I-associated factor PAF67	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000717 all species →	Domain	Proteasome component (PCI) domain	Interproscan
IPR019382 all species →	Family	Translation initiation factor 3 complex subunit L	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13242 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR 3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003743 all species →	Molecular Function	translation initiation factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005852 all species →	Cellular Component	eukaryotic translation initiation factor 3 complex	Interproscan
GO:0006413 all species →	Biological Process	translational initiation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15029	EIF3L; translation initiation factor 3 subunit L	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.