Gene detail

Detailed information of ENSAPQP00000013298.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028417400.1, polycomb protein Suz12-like [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000014804

ATACCATTCATTTCCATAATTCCATTCCACCACGCTGGACAACTGGTGGAAATAATGGCGCATGTTTGGCATTGAAAGCGAGCACGTTTGCCCCATTTCTTTTAcgtattttttactttatcGCGTGAACTATTCCACGCGACGTTTCGACAATGTCCGACAAAGGAGAAACGGTTTATACGGCCGCAAGGAACCCCAAATTCGAACAGTTACGAAGCGACCATGAAACGTTCCTTCGTACTTTCGAAAAACCGACACAGATATATCGCTTTTTGAGAACACGGAACATAATAACGCCCATATTCTTACACAGAAATTTATCATATATGAGACATCGAAGAACTaggaataataataataaagaacAAAGGGCAAAGTTCAAAGTTGATGATTTGCTAGAGAGATGCGAAAAGGCGAATGCAGATAGCTCTCTTCTGAGCTCAGAAAAAAGTGGTTACCTTAATCTGTCGTTCAAGGGCTTTTTTCGAGGACCAGtACAAGGAGAGGTTCCAACACCATCGAGTGAGGACCTTGCTGATCAAAATCTGGTTCCGGCCGAAGTATTTATCGTTAAAATTTGTCACAAACGAAGAAAGGATAACAGTCCGCCCGTTATTCAAGAACGTGTCGGTCGTTGCCTCGTCCCCCACAACCCCTGCACGGACCAAGATCCGCTTCTCGAGTCCTGCAGTGTCTCGATACCGCGGTCGTATTTCAGCCCCAAAACCAACAGAAATGTTCGCTCGTTCATTTTGACTCTGGAGGTCAGCATCCCCCTCGTTGAAACGGCgaaaaaaaagaaacgaaAGAAGAACGATCCGAAGCCTGAACAAAAACAAAAATCTGACTACTCTGAGCCGCCGAGCAAGCGCCTTCGTGGTCAGCGGGTGCCCGCAATTTCTGAAAACGAACAGCCCGAGAGGCGAGCTTCCGGGGACCTGGAGACTGGTGCCCAGTCTGCCGAGGAAGCGTCcgataaaatggtttacttcACCGAACTGATTATATTCGGCAACGAGCGAGAGTGTTTATTGGTTGACGGGGAGTACGAACTGGTACTACACGACAAAGGAAATGGCAAACAACGCAAGAGGAAGCAATTGTCGTGGGAGACCGACTATAACGGGAAGCTTGGACCATTCGAATTATTCGCGTTGGGTCCGACATTGAAATTCTCGCTTGCTTGGGAAGGCAAGCCTTTGTACAGCAGACCGAGCTGCCTTCCTCTACGAGAGCGACAGCTAGACTCGAACGGCAACATGGAGTTAGCCAGCGTTGTCTCGACGGACGAAAATGAAAGGGAAAGCAAGAAAAGAGTGAGGATTTTTTATCAGTTCATATACAACAATCACACGCGACAACAGACCGAAGCGCGTGACGACTGTCTGTGTCCCTGGTGCAGCGTGAATTGCGGAAAACTGTATAGCTTGTTGAAGCACCTCAAATGCTGTCATGGTCGATTTCTTTTCACTTACGCACCTCACACTAAAGGAGCTCGAATTGACGTATGCCTGAACGAAAACTACGACGGCTCCTATGCGGGTGGTACGGAGGATCTCAACGAAATGGTTGGGTATGCCTTCAGTCGAGATGGTCCTGTCCGTAGAACTCCCTATACCGCTGCCCTGGTGTGTAGGCCGAAACGATGCAAGGAAAGTTTGAGTGAATTCCTGGAACCAGATGAAAGCGATGCCGATATAACAAGGCCTTTTTTTAACGGACACAATAGAATGTATTTTCATTCGAATACCTGTCTTCCCATGAAACCAGACGACCTAGAATTCGACAGCGAAGACGAAATCGATCCGGAGTGGCTGCGTATTAAAACACAACAGATGATAGACGAATTCACAGATGTAAACGATGGGGAAAAGAAATTGATGAAATTGTGGAACATTCATATCATGAAACGAGGATACATCGCCGACTTGCAGATCCCCGAAGCTTGCAAGAGCTTTGTGCGCGAGTATGGCAATGAGATTGTTCGAGAAAAACTTTGTAGGAATTTCTTACTCCATCTTGTCAACTTGAACGACTTTAACATCCTAGGTAAGGCACAGCTACTGCAGACAATCGAACTGCTTGATGAAGTAAGACATTCGTAATACATGCATGATTCTTCTGTCCTTTTTAATCCCGTGTTTAATACCAATAACAGTTAGTGTGGCAATTTTTCGAGGGCTGTTCATATGAAGAGTGAACTCGATtcagcctgttttccactaggccgatatgttcgcgcgaacagacagaaaagcaacctgattggctggcgacaaacactgacgtcatcaccagccaatcacattcgctttcttgcttgttcgcgcgggAAAACAAACTGAGCTGTAAACAAGTGGAAAACGGTTTCTtgcgagaaaacatttcgaaaAGTTTACAAACGAGCGAGATATCGCTTTGTTAAAGGAAATGCAAATTAATGGTCGATTTATGACTAGATATAGTGCTCAGTATGTGGTGCATTATAATTCACTTATAATTACTTTCCCTACGGCGAATAACCGCATGTTGATTACTGACCAAGTTCAATATTAAGtagattttctccttttggtggatgtgaacgagtcaaccagtcacgaatgtttaAATGAGAAAGCATGCACTCAGCATATTCTTcatcaatccactcgttcacatctttcaaaaggagaaagCAGCAAAAATCAGGTTGTAAACGGACCTTAAGGTAAGTTTACTAGTAGTGGTTATGGtgttaatattattaaaattgaCCGATTTAACGTTAACTGTTATCTTCAACCAACGACCATTTTCCATTATTAACTGGCTTGAATCTCCTCGGTTTCCCTTGTGGAAAGAATTTCTGCATTATATTTCGATTTTCCGCCAGCAACTCGAACACTTTTCTTAGTTTCTCCACAAAGTTCGCGGGCTCACAATGAGGCGAGCTCGAAAATGactgcaaaaaaatgcaattgtTAATTGTGGTACTGGAACATGTACCGGATTTTGTGCCCTTTTTCGATACCAGGGTCGAAACATCGGCATCTGAAACCGTTAATGGATCACTGTCGCTCCTGTTGAACTTAAAATAACTGGAACGCTACGTGAGGCGGGAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q15022	Polycomb protein SUZ12 OS=Homo sapiens OX=9606 GN=SUZ12 PE=1 SV=3
Q80U70	Polycomb protein Suz12 OS=Mus musculus OX=10090 GN=Suz12 PE=1 SV=2
Q0VA03	Polycomb protein suz12 OS=Xenopus tropicalis OX=8364 GN=suz12 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006509 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09733 all species →	VEFS-Box	VEFS-Box of polycomb protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019135 all species →	Domain	Polycomb protein, VEFS-Box	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22597 all species →	POLYCOMB GROUP PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0016586 all species →	Cellular Component	RSC-type complex	Interproscan
GO:0031490 all species →	Molecular Function	chromatin DNA binding	Interproscan
GO:0035098 all species →	Cellular Component	ESC/E(Z) complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11463	SUZ12; polycomb protein SUZ12	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.