Gene detail

Detailed information of ENSAPQP00000014556.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3985340.1, Bloom syndrome homolog [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9DEY9	RecQ-like DNA helicase BLM OS=Xenopus laevis OX=8355 GN=blm PE=2 SV=1
O18017	RecQ-like DNA helicase blm-1 OS=Caenorhabditis elegans OX=6239 GN=him-6 PE=1 SV=2
P54132	RecQ-like DNA helicase BLM OS=Homo sapiens OX=9606 GN=BLM PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000285 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16124 all species →	RecQ_Zn_bind	RecQ zinc-binding	Domain	Interproscan
PF00270 all species →	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF09382 all species →	RQC	RQC domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002464 all species →	Conserved_site	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR032284 all species →	Domain	ATP-dependent DNA helicase RecQ, zinc-binding domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR011545 all species →	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR018982 all species →	Domain	RQC domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13710 all species →	DNA HELICASE RECQ FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006260 all species →	Biological Process	DNA replication	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0043138 all species →	Molecular Function	3'-5' DNA helicase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000014556.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.