Gene detail

Detailed information of ENSAPQP00000017725.1 in Leptogorgia sarmentosa

Genomic Location: chr17:211605...218253
NR annotation: CAB3988191.1, FAD-dependent oxidoreductase domain-containing 2-like [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSAPQT00000019458

attaattttataaaaaataacatatatgGATGGAAGATAAGTTGAGATATTTCTTGACTCAAGATTCCTGTCTGCTTTCAACGTACTCTAACTCTCATTTGTACCTTTTCAGGACTTCAAAGTGCTTACTTTTTGGAAAGATCAAGTCGGGACTACGTCGTTTTTGAGCGCAACTCCGAGGCTGgTAAAACAAATAAGGAGTTCAACTTGAGACACGACTGGAATTCATTGTTGAGCGATGATGAAACCCTTCGTATGACAAAATACAGCAAACGACTCTATCCCAAGGCTGATGTTTTGGTGAAGTACCTCAATGATTTTGCAACGAAATTGAAGCTCAAAGTTTCCTACAATACTGAAATCAAAAGTATCTCAAAACATCCTGTGAAACAGTCATTTTTACTTCGAGATCAGAATGATAATATGTACACATGCAGTGACCTCATTATCAGTACTGGTATTCCAATTGAAAATGTTCCCTATTTCAAAGGTGTTGAACACACAGAGAGTTACGGCACAATGTCTTTAAACCGAGATGACTATGAAGGCAAATCAGTCCTAATATTAGGAGGAGGAAATGCCGCATTTGAAACCGCTGACAACATCATGGAGTCAACAAACTTGGTGCATGTTATGGGAAGaTCAAGGGTACGTCTTGCTTGGTCAACTCATTATGTTGGAGATGTGAGAGCTGTCAATAACCGCATACTGGACAACTACCAATTGAAATCTCAGGATGGATTTTTAGAAAAGTCCTTTTCAAAACTCAGTGTTGTGAAACATGATGGGCAACTTTATGTGGACTTTTATGGTACAAAAGGAAAGATTTTGAATAAAACAGGAGTTGCTCCTGATAACTATTCTTTGCGGGATCCTTATGATAAGATATTAAGATGTTTAGGCTTCAGGTTTgattattcaatatttaacGACACAGCTATGCCAGAGATGGGCCTGGGGAAGAAAAGTAAATATCCACTCATCACTCCAGATTTTCAAAGTCAGAATGTCCCAAGGATGTGGTTTGCTGGAGCAACTGCACATTCTCTGGACTGGAAGAAATCTGCTGGGGGTTTTATTCATGGCTACAGATACACAGCTCGCTCACTTCATCGAGTACTGGAATGGAAGAATCATGGAATAAAATGGAAACACCATGTGATTCCACAAAGTCAGATCCTCAATTATATCACAAAGCGAGTGAACGAAGCATCTGGTATCTACCAAATGTTTGGTATTTTGGTTGATGTAATTATTTATGTTAATGATGGACAAGCAATATACATTGAAGAATTTCCTTGCAAGTTGCTGGATCAGTTGGAAAGGCACTCAGGCTTGCAGAGTGGACCAACAATTGTGGTGACTATGGAATATGGGGAGTCTTTCTCTGGGCCAGGACGAGACACTTTCCATGAAGACCGAGCAACACTTAATCCAGCCCGCGCTCACATCTCTAACTTCCTCCATcctgttttatatttttatcgTCAACCTGTCAAAGTCTTAGGAGCAGATTATTCGCTTCCTAGACCTGACCGTATTCATCATGTTGTTGAGGATTTTCTAACAAAGTGGACTGGCCCATTCAGTCATCTTGTGCCACTCAGAAGATTCTTGGAACAAGTCCAGGATGAAGATCTCCGAAATTTCTTCTCACAAAGTTGTTTCAAGCTTGCCATGACACACACAAAGCTGCCAACAAGATGCAAGGAACATTTTATCCAAGGCTCAACGCTTCCTGGTGTATCTGCTCTTCTCCATATTGCTCAAACCCAAAACCTGCTGGTGTGAACAGAAACCTGAAGAGCATCGAGAGTGATGGTATATAACGTGCCAGGTTAGAACATGTGACGTGTGCAGTTGTGGTTGCTAAGCAACTGGATTAAAAGGTCTGGATTCTATCTGAGATAACATATGAGAAAGAGAACTATATCCATGGGCAGATTTTCGCAAAAGAGGTTTTAGTAAAAGCTTGAGTACTGCCAGGATTGTGGAGTTGGGATCTCGTACTCTGAGACTTTGTATAATACTTGCAATATAAGTTCACATTTTTTCCACAGTTTATTTATTCAGTCCCTGGAAAGGTGTTTGCCTATTGGCTGATAATTCACACAGAGAAAAAAACTAATAACTCTTGGCAATTTGTCTAAATTATCATATATATCAATTTAAAACTTGAAATTGAGAACGAATTCAAATAACGGCGTAATTTAGTTTTGTTTGAAATCAATACATGACAACGAACATGTTTGTATTAATGACTAACTAACTTCATTTTTACTCAATGCttttatcagttttaaactgttcttcctggaggtccagtaaggatcatctcttattgatccagtgttactgaAATATTGGTATCCGAACTTTGTTCCGACAGTACTGCTAAGATTTCCGCCAATAATTATAACTCATCTAAATTTCATATCCAGTTAAACACCTCATCCCTGTGAGATTATTTGGGAGTTTTTGAGAGTAAAACACTTGAACATGCTCCCCACTGCAGgcttaaattattttcaaaagaatttttattACCTTCACAGTTTCATCACTTTGTTTACCTCAAGGCAACAAAACTGTGTAAATTTAATCATAGTCGAGCAGCTGCGTCGCtacaaatgaaattaaattgtCAAAGAATATTCTGTAATTTACCCTGATATGTGAATATCCTGAACGAAGTGTACATTTCAAATTACGTCGTTGGCGTTGCT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IWF2	FAD-dependent oxidoreductase domain-containing protein 2 OS=Homo sapiens OX=9606 GN=FOXRED2 PE=1 SV=1
Q3USW5	FAD-dependent oxidoreductase domain-containing protein 2 OS=Mus musculus OX=10090 GN=Foxred2 PE=2 SV=1
B0UXS1	FAD-dependent oxidoreductase domain-containing protein 2 OS=Danio rerio OX=7955 GN=foxred2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002549 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13738 all species →	Pyr_redox_3	Pyridine nucleotide-disulphide oxidoreductase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036188 all species →	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR050982 all species →	Family	Auxin biosynthesis and cation transport	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43539 all species →	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005788 all species →	Cellular Component	endoplasmic reticulum lumen	Interproscan
GO:0030433 all species →	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01301	NAALAD; N-acetylated-alpha-linked acidic dipeptidase	EC:3.4.17.21	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.