Gene detail

Detailed information of ENSAPQP00000018849.1 in Leptogorgia sarmentosa

Genomic Location: chr3:18724369...18727450
NR annotation: CAB4005197.1, Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSAPQT00000020757

ATCAAATACTGAATGTCTGAATGACTTCAAATTTCTGCATGAGAAAATGGGGAAGTCCCTGTACTTCATGAAAGAAAAGTGTAATTCCTGGTTGGAAAATGGCGGCGCAATCGCGTCGAATGACTGTTATATTTGTGAAAGAGGATGCCTTTTTTTCACCATCTGTTTCATGTAATTTTCTTTACGGTGTAGAAAGTATCGCCACGAATGGAGATAAAATGATATATGTGGATGATTTTGTGTCTATGCAGGAAAAGAAACTTGAACGAATACCAAGTCAATATACACTCAATAAAGAGTCAATTAGGAACTCACGAAATTCCAATGTTATACTCGGGTTTGTTTGCAAAAACGATGTGGACCAAGAACTTTTATCTGAAATCCTGAAGCAAGAAGTTAATATGAGGCCATTTTGTCTTCTAGTAATATCTGTAAATGAAATAGTCAGTGGAAAATGGCTTGTGCTTGTAGACCATTCTCGGCAAACGCCCTATTCGAATATCAAGAATATTCCTAAAATTGAAGTACGCATTACCTGTCTTAAAAAAGGTTTAAACCTTACCAAACTGAATTGGCTGCATTCCGTGGATTTAAATGGGACCTTTGGGAGAAGGAAGGACCTATCTAAGCCTGATTTGAATGGAATAATTACAGGTCACCGAACAACGAATGAACCTGCGACAACTGACACGCGTAAAAGGTGTAACCATAGTTCTGGCTTCAAGTTGCTATTTCTCTCTATTTCATGGTTATTTGATTTGGTTCAGCCTAGCCTCACATTCCCtacaattttgaaacaatttgcCTACCATTTATCCAAATATCTCTTTGTTGCAAAACAGCTGTCATGCAGATTTGATCAGATTTCTAATATGTTTGTTAATAGACAAGAAAGCAATAAACAGGGTAATAATAGTTCCAAGGCACTAGATGATGGAAACCTGATTATGTCACTATTATTCGACATTATTTTGGGGTTTCTTGTGATATATTTTGTCTTCTCAAACCAGCATTGTTTGTATATCTCGTCATggttgattggtcaaaaatacAATATTGCAGAACATTTATCAAGCCTGCTCCGGTGGCTGATGGGTGCACCAGCTGGTTTGAAATTGAACATACCACTGAATCAATTTCTGGGAAATTTCTACATCTACCATGTCCATCTGTGGACAAGCTACCTTTATTTTGTTGAAGCATATttaccaaaaataattttatgcTGCACACTTGCTGGATGCCTTGGTGTAACGTTCCTGCTTGCTTTATTATGTGACATATTCTTTTTTCTAACAGTACACATTTACTGCTTCTATATTTATGCTGCCAGGCTTTACTGTTTGGAAATTCATGTCTTGGCTTCATTGCTGAGGTTATTTACTGGGaagaaatggaactttctacgTAGTAGAGTTGACTCTGTTGAGTATGATGTGGATAGGCTGTTTATTGGAACCTTACTGTTTACAATCTTGCTGTTCCTATTCCCAACAGTATTTCTTTATTACATTGTCTTCACCAGTCTTAGATTGTTGGTTCTACTTGTGCAATCCATCTTATGTGGTGTGGTGGCTTTGTTGAATTCATTTCCTTTCTATGAATTATGGTTGTACATTGTGCATCCAGAGAAGTTGCCAGGTCAAGTTGTTGTTAATACTAAGAGAATTACCACCACCTCTGGTCTTGAAGACTGCATCTTTATTGAAAACGTGAATGTTGTCCAACCAGACTCTTGTTTGTACTTATCCTTCAGACACAAATGTTTGCCATGTGGAATGCTCTTTAAAAACTGTAGAAGTGTTATATTTGAAACAACATATAGGGGCATATTCGGTGACGgtttatttaaaaaactatTAACTGGACGATTAATTAGCAAGCAatgaaaatagaaataaattgAGATGTTTCCCGTAAATCTACTTTACTTTCTTCAACCTAGTTTCCATTTTCCTGCCGTTCGTTTCTGAGGGAAAGTCTAGCACTACTAGTCTAACCAACAAACGACAATGGTCGCTGGGGTTAGAACTCAACGACggttattttttgttgtttatggTCGCTGGGATTTGGAGTAGTGGCCTTATTGACTTATGTAATATTTTTGGGGTAATTGGTAAAAAATTagagaattttcaaaaataatcaAATGTAAACCAAAATTTTATCCATTTGGTAATTTAAATATATGCAAATGTTTGGGATCGGTAtgctttattttcagacagtaTTTTGCCCAACTGGGTGATATAAAAACATGGTGCAAATTCATCAATCAGTAATCAAGTCCGGgttatttcaatttgtttttttatttgaattttctgaTTCTTTGTTTTACAACGGGCGACTCGTCTATTATAAAACCCAGTGCTGCATGCATTTTTCAGACTATTGTATATTTAAAGACGTCTATATTATACTCACTTGAATTACCAAACCTACCATTTCTTTCCAACGTCTTTCATTTATGATTATATACCATCTACTACACATGTATGTTgttttctatattttttatttgtagGCACAAACCTTACGGATCCTATTATACTTTCTTTTGGGGCCCTTGTCTTTTTACTAGGAAACTCTTTAAACATAAATTTTTACCACAGAAGTATGTTTTGATTGTCTCATTCAATCTCGTGGCAAATATtacaaaacacaaaaagaaCAAAGTTACATTCATTTTCGTCGAACTAAACATTGCAATCATTTCTTCCgttcttttattttcatgtcTTCTTTTACTCTCCATAGCATTAACTCAACACAAGATACGGCGTCTTCTAAACTGTCATGTCCCTCTTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9QYT7	Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q OS=Mus musculus OX=10090 GN=Pigq PE=1 SV=3
Q9BRB3	Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q OS=Homo sapiens OX=9606 GN=PIGQ PE=1 SV=3
O14357	N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gpi1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007550 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05024 all species →	Gpi1	N-acetylglucosaminyl transferase component (Gpi1)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007720 all species →	Family	Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q/GPI1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21329 all species →	PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT Q-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0006506 all species →	Biological Process	GPI anchor biosynthetic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03860	PIGQ, GPI1; phosphatidylinositol N-acetylglucosaminyltransferase subunit Q	-	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	ko00563	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.