Gene detail

Detailed information of ENSAPQP00000019035.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3984602.1, 50S ribosomal L16 [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q04PU5	Large ribosomal subunit protein uL16 OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) OX=355277 GN=rplP PE=3 SV=1
Q055D7	Large ribosomal subunit protein uL16 OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) OX=355276 GN=rplP1 PE=3 SV=1
Q72NG8	Large ribosomal subunit protein uL16 OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) OX=267671 GN=rplP PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006636 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00252 all species →	Ribosomal_L16	Ribosomal protein L16p/L10e	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036920 all species →	Homologous_superfamily	Large ribosomal subunit protein uL16 superfamily	Interproscan
IPR000114 all species →	Family	Large ribosomal subunit protein uL16, bacterial-type	Interproscan
IPR047873 all species →	Family	Large ribosomal subunit protein uL16	Interproscan
IPR016180 all species →	Domain	Large ribosomal subunit protein uL16 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12220 all species →	50S/60S RIBOSOMAL PROTEIN L16	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0019843 all species →	Molecular Function	rRNA binding	Interproscan
GO:0005762 all species →	Cellular Component	mitochondrial large ribosomal subunit	Interproscan
GO:0032543 all species →	Biological Process	mitochondrial translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000019035.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.