Gene detail

Detailed information of ENSAPQP00000019157.1 in Leptogorgia sarmentosa

Genomic Location: :...
NR annotation: CAB4023927.1, phenylalanine ammonia-lyase [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSAPQT00000021148

GGGCATTACTACTTtttcACCCATGGCTATGTGATTAGCTTGTTAATGactaacattttttttcatagaAATGCTTTGAGATTTAAAAGTATCCAAAGCATTGCTACAAAGGAGTGTCTTTCTCCGCACACAAATCAAGTTGTGAAGTTACTTGAGGATTACAAGTATGGATCAGAACACATTAGTCTTAATGGAAATGACTTGAGCATAAGTGACATTCATAGTTTTTTCACTGGCAAGTTTCATTCAGCTAGTCTTACTACTCAAGCTTGGAAAGTCGTAAAAAGAAGTCATGAATACCTTGAGAAAAAATTGTCTGAGGGAATATGTGTGTATGGCATAAATACGGGTTTTGGTGGCAGCGCTAATGTTCGGTATAAAAAAGATGCTGCTGTAAATGCAACCCTGATCACTCACTTAAATGCTGGTTTTGGTCAACATCTACCCCTAGCTTTAGTGAAAGCTACAATGGTAGCTCGAGCTAACAGTATTGCACTTGGCTACTCAGGTGTTCACAGCAATGTTGTTGAGCTGTTGCTTGAATTGCTAAATAATGATATTATACCATATGTACCCAAACGAGGCTCCATCAGTGCAAGTGGTGATCTCATGCCTACATCTTATATTGCTGCCTGTCTGGAGGGAAGACCTAATTGTAAAGTAAATGCTAATGGCATTGACactattgctcctgtggctctAAAAGAAGCAGGACTTTCCCCAGTTGTGTTGTCAGGCAAGGATGGTTTAGGCCTTATAAATGCTTCGTCATTTGCAGCAGTCCTTGCAGCAGAAGTATTGTATAAAGGAAATATTGCTATTCTATTAACCCAAGCAGTTGTTGGTATGGCTGTTGAAGCATTGGAAGGTCGTCTAGAATCATTTCATCCTCTGATACATCAGAAATGTCTGCCGCACGTCGGGCAACAAGAAGTTGCTTGTAATGTCTTGAACTTTCTTCAAGATACAAAATTGGCGATCTCGCAACCAGAAATTAAACGAGGCTTACGCGAGGGTGAATTGCGCCAAGATCGTTACGGTCTGCGGACATCTCCCCAATGGCTGGGACCTGTGTTGGAAACAGCAATGGAATCTATGAGAAGAATTAACATTGAACTTAACAGTGCTAATGACAATCCAATTGTTGATTTTCAAGATGATGAAATTTTGCATGGTGGTAATTTTCAAGGTACTTCAACAACGGTCGCTATGGACCAATTTCGACAAAGTATGCAACTTTGTGGAAAACTTCTCTTTGGTTTGATGTCagaaatagtagactgtactATTAACAATGGCCTGACTCCTAACTTATGCGGTGGCAATCCTAATGTTGATATGGGTTTCAAGGGAACAGAGATAGCTATGGCTTCGTATACCTCGGAATTAGATTTTCTCAACAGTCCAGTTTCTAATCATGTTCTTAATGCAGAGATCAGAAATCAAACGGTCAACTCACTTGCTTTGATCTCAGCGCGCATGTCTGAAGAGGCTgttgaaattttccaaatgcAACTGACCAATATTTTGCTGGCGCTGGTGCAAGCAGTGGAACTTCGCTGGCTAAAGACCCGGGTGGAGTCGATAGTTTCCGAGTTATTACCCAATGGTAGCACGTGTGTGAATCAAGCCCTGTTATTTAAACTGGTTCCTTGGTACAAGTTCTTTAGTTGTACACAAGATGCTATTGATGAAGTGGCTAATGAAGTTCCTGGTTTGGATGAGGTTCCAATGAAGAGCTTTCTTGAGACGATTGTGAGAGAAATGGACATCTTAAGGAGTGGTTTGAAGTCTGGAGAGTTCGCGCAGCAAATTGCTCAAGATATGGGGCAAGGTACACGGCTGCTTTACCTATTTGTGAGAGAAACACTCGGCATTTGCTTCAATGATGGTGAAGAAACATTGGATACCAGCTTGCAGTCGATATATGATTCCATAAAAGATGGCCGTCTAGATGACGTAGTATTAACTTTGGCATGTCTTTCCAAAGACTATCAGATTGAACGAGAAAGTGTCATGTAA

Transcript

ENSAPQT00000021148

Protein

Uniprot

Uniprot term	Description
Q9SS45	Phenylalanine ammonia-lyase 4 OS=Arabidopsis thaliana OX=3702 GN=PAL4 PE=1 SV=1
P52777	Phenylalanine ammonia-lyase OS=Pinus taeda OX=3352 GN=PAL PE=3 SV=1
P0DO55	Phenylalanine/tyrosine ammonia-lyase 1 OS=Fritillaria unibracteata OX=152095 GN=PAL1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00221	Lyase_aromatic	Aromatic amino acid lyase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023144	Homologous_superfamily	Phenylalanine ammonia-lyase, shielding domain superfamily	Interproscan
IPR001106	Family	Aromatic amino acid lyase	Interproscan
IPR024083	Homologous_superfamily	Fumarase/histidase, N-terminal	Interproscan
IPR008948	Homologous_superfamily	L-Aspartase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10362	HISTIDINE AMMONIA-LYASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016841	Molecular Function	ammonia-lyase activity	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10775	PAL; phenylalanine ammonia-lyase	EC:4.3.1.24	Phenylpropanoid biosynthesis	ko00940	deepkoala