Gene detail

Detailed information of ENSAPQP00000019206.1 in Leptogorgia sarmentosa

Genomic Location: chr3:11021860...11027775
NR annotation: CAB4026853.1, serine threonine- kinase endoribonuclease IRE1 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSAPQT00000021207

ATGCCATTGTATTTAAATTGTGTCGTGAAGGACGTTGCCAAAGAGTTGTCTTGTATTTTTGAGTACCAGCTATTACAACTGAAAAATGATGAGCAAGTTAAGATTTTAGCGGAATGTGCGGTCGATTTGATGTTAGATCTACGAAGAGACGATACATTCGACAGAAACACTTTACTACGAAAAGTATTAAAAGATGGCGACATGAAAAGGAAACAAATACTCACAAGCGTCAAAGATCGCAAGTGGTCAGCTCCAAACGTGTTCCGAAAACCTGGCTTGCGACGAATAATTTTCGGAAAGAATCGCGCGcaatttaaacattttgttaaaccAAATGGTGCTTGTAACACGTGGAAGTATGGTTATCGCGGCCAATTTCTTGTATGGAAGAAATGTGATAGTGAAAACAACAATCGTGAAACCTCTCCTATGGTTGAAACTCCTCCCACTGATGAAACTCATGAAGAGGCTTGCGCCGTTTTTTGCAAAGAATGTTCTTCTATGAAAATGAATGATAATATTCCCAGTAGTCATTACTTCAGTGATTCCCAAATTGACAATGAATACAACATTGATTCACAAGAAACTTTAATTTATCGTCCAATGCACATTTTAGTTCGATGCCCAAAAGTGTTGGATTGTTTAAAACAGCTTCCAGAAAGAAGGCCCTCATTAGCCAGTTTTATGAAGAAGAAGCTGGGCCTACCTGAAGATCATCTAGTACACCCCGTATATCGACCACACTCACCAAGAAAGGTTTCTGATCTCCAAAACTCAGACCTTACCGGATCAGATTTCAGCTATTCTGATTTCACAGATTCCTGTCTCGAGAAATGCGATTTAACCAAATGCAAGATGTTGTTTGCGCATCTAACTCGGGCAAATCTTTCTGGTTCACTTTTTTGTGACACATTCATCAGTCATAGTGACTTGAAGTATGTTGTGGCTCGTCACTGCGAGTTTACGAAGACATCGCTCCTTCACTCAGCCGTGGATGGCGCACATGTGGAGTTTCCAGAACCCTCTTTCAGTGGAAATGTATATAACGGGACCAATATATGCGATGTCATGACTACAAAGAAGAATGAGTTTAATCGCGACAAACAAGaaAGGACGTCTGAATCCAACAACTCCTCTTCAATGATTGGAGCCGGTAACTTGCCAGATGATTGCGAGGAGATGTTACCTAGCAGTAGTGGGAGGTGTTCACCTGCAAATGCAAGAAATATTCGCAACGGCAACATGAGCAAATCGAAGCCCAGTGAAATTGACAAAGATTTATATAAAGGAACCGGTGTGGAAGGCGCACATGCGGCATCCGTTAAACCCGCGAGTATAGGTTGGGACAGTCTTGAAGGGACACACACTGATTGCATCGGCATCACAGCAGAAATGGAGGAGTTGAATTGCAACAAAGAAGATAACTCAGAATCCTGGAAATGGGAAAGCAAGTCGGAAATTCACAgacaaaaatttataaacttgcGCGAACACGCAAAAACCCTTCCCGAAGAAATCAAAGTGGTTAACGGAGTGCGCGTTTGTTGCTCAGAGGAGTTTCTTCTTGGTATGGGATGTGAAGGCACTCGAGTTTATGTAGGATTAGCAAAAGACGGAGTCGAAAAGGCCGTAAAACGTTTGCCCAGAGATGCTTGCTCTAGTTTAGCTGAAcgagaaaagaaaattttaaacaaacttAACACAATGAAGTCAAAGTATGTGGTGAACTATTGGTTTTTAGAGGACCAAATCGATAAGGACTATTTATTTCTAATCTTGGATTTATGTGAGGAAACGTTGGAAAAATTTGTCAAGCGTAGTTCTAAGGAAGATCTTGTAAGAGATGCACCAGATATTATCCAGCAAGTGCTGAAAGGATTAGTTGACCTCCATTGCGATTTGAATCCTGTTTTGCACCGCGATTTAAAACCATCCAATATCTTGAGAAACATTCAGGGTAATTGGTTGCTGGCAGACTTTGGTATCAGCCGGATCTTGAAGGAAACTGAGACAACCCATGTGAGCATATCCAGGGGGTCGGAATATTGGAAAGCCGTCGAATCGTGTCCCTCCACAGGCACGACTGAAGATGACCAGTCTAGCAAAGTACGTTACAAGAAGGCATCTGATATTCAGGTGGCAGGATTTGTGGCATTTTACATTCTGACTAAAGGAGAACATCCTTTTGGGGAAAAACGACACCGACTTGACAACTTACTCAATGGCAAACCAGTCGGCTTGAATTCTCTGAAAGATGATGCTGCGAAAGATTTGATTGCCTGGATGCTGAGTCACGATCCCAACGATAGACCGTCAGCCAATGAAGCGCTGAAACATCCGTATCTTCAGCCTCCGAAAcagcagtttaaaatgctgtGCATAGTAGGAAACCAGCGGGAGATCAAGACAGATGATGTCAAGTCGCATGTCGTGCGAACGTTGAATAGCGATCCCAATGATTGGCGAAATGAAATGGAACCCGATGTTCTGAAATATTTATCCACTGATTGTTTGAGTGGGAGAACATATCGTTATAGCCAGTCCTGGACGGACTGTTTGCGACTTATCCGAAATGTGAAGGAACACTGGGAAGATCGCCCAAGGCCGcgaactgaaatattttacattgtgGGAAATCCCCAGGAGTTCTTCCTCAACCTCTTCCCCAGTCTACCTGCAGAGGTACACAGAATTATCAGGTCATGTGATTGGAAAGAACGGGATGACCTCAAGGAGTACTTCATTTAA

Transcript

ENSAPQT00000021207

TATGTTACAAATTTCGTTATTGCCAATTACCTGATGGCCCCTTAAATCATTCAGCTAGTTGTGATCGCCCACAAATGAATGCTCAGTACAAGCTGTAAAAGTCTATTGTCTGCCATGTACTTACTGCTGTTTTTAAtataggaaacaatgtttcatCTGAGCAAGAAGACGCTCCAAAGAACAGCAATGATGAGATCAGCCAGTTCATATTGCATCGTTGTGAATTATTCGAAAAGACAGTTGAAAGTATTGCTGAGAGGAAACTGGAGATTAAAACAGCATCTGTGCAGGATCCTAAGATGCCATTGTATTTAAATTGTGTCGTGAAGGACGTTGCCAAAGAGTTGTCTTGTATTTTTGAGTACCAGCTATTACAACTGAAAAATGATGAGCAAGTTAAGATTTTAGCGGAATGTGCGGTCGATTTGATGTTAGATCTACGAAGAGACGATACATTCGACAGAAACACTTTACTACGAAAAGTATTAAAAGATGGCGACATGAAAAGGAAACAAATACTCACAAGCGTCAAAGATCGCAAGTGGTCAGCTCCAAACGTGTTCCGAAAACCTGGCTTGCGACGAATAATTTTCGGAAAGAATCGCGCGcaatttaaacattttgttaaaccAAATGGTGCTTGTAACACGTGGAAGTATGGTTATCGCGGCCAATTTCTTGTATGGAAGAAATGTGATAGTGAAAACAACAATCGTGAAACCTCTCCTATGGTTGAAACTCCTCCCACTGATGAAACTCATGAAGAGGCTTGCGCCGTTTTTTGCAAAGAATGTTCTTCTATGAAAATGAATGATAATATTCCCAGTAGTCATTACTTCAGTGATTCCCAAATTGACAATGAATACAACATTGATTCACAAGAAACTTTAATTTATCGTCCAATGCACATTTTAGTTCGATGCCCAAAAGTGTTGGATTGTTTAAAACAGCTTCCAGAAAGAAGGCCCTCATTAGCCAGTTTTATGAAGAAGAAGCTGGGCCTACCTGAAGATCATCTAGTACACCCCGTATATCGACCACACTCACCAAGAAAGGTTTCTGATCTCCAAAACTCAGACCTTACCGGATCAGATTTCAGCTATTCTGATTTCACAGATTCCTGTCTCGAGAAATGCGATTTAACCAAATGCAAGATGTTGTTTGCGCATCTAACTCGGGCAAATCTTTCTGGTTCACTTTTTTGTGACACATTCATCAGTCATAGTGACTTGAAGTATGTTGTGGCTCGTCACTGCGAGTTTACGAAGACATCGCTCCTTCACTCAGCCGTGGATGGCGCACATGTGGAGTTTCCAGAACCCTCTTTCAGTGGAAATGTATATAACGGGACCAATATATGCGATGTCATGACTACAAAGAAGAATGAGTTTAATCGCGACAAACAAGaaAGGACGTCTGAATCCAACAACTCCTCTTCAATGATTGGAGCCGGTAACTTGCCAGATGATTGCGAGGAGATGTTACCTAGCAGTAGTGGGAGGTGTTCACCTGCAAATGCAAGAAATATTCGCAACGGCAACATGAGCAAATCGAAGCCCAGTGAAATTGACAAAGATTTATATAAAGGAACCGGTGTGGAAGGCGCACATGCGGCATCCGTTAAACCCGCGAGTATAGGTTGGGACAGTCTTGAAGGGACACACACTGATTGCATCGGCATCACAGCAGAAATGGAGGAGTTGAATTGCAACAAAGAAGATAACTCAGAATCCTGGAAATGGGAAAGCAAGTCGGAAATTCACAgacaaaaatttataaacttgcGCGAACACGCAAAAACCCTTCCCGAAGAAATCAAAGTGGTTAACGGAGTGCGCGTTTGTTGCTCAGAGGAGTTTCTTCTTGGTATGGGATGTGAAGGCACTCGAGTTTATGTAGGATTAGCAAAAGACGGAGTCGAAAAGGCCGTAAAACGTTTGCCCAGAGATGCTTGCTCTAGTTTAGCTGAAcgagaaaagaaaattttaaacaaacttAACACAATGAAGTCAAAGTATGTGGTGAACTATTGGTTTTTAGAGGACCAAATCGATAAGGACTATTTATTTCTAATCTTGGATTTATGTGAGGAAACGTTGGAAAAATTTGTCAAGCGTAGTTCTAAGGAAGATCTTGTAAGAGATGCACCAGATATTATCCAGCAAGTGCTGAAAGGATTAGTTGACCTCCATTGCGATTTGAATCCTGTTTTGCACCGCGATTTAAAACCATCCAATATCTTGAGAAACATTCAGGGTAATTGGTTGCTGGCAGACTTTGGTATCAGCCGGATCTTGAAGGAAACTGAGACAACCCATGTGAGCATATCCAGGGGGTCGGAATATTGGAAAGCCGTCGAATCGTGTCCCTCCACAGGCACGACTGAAGATGACCAGTCTAGCAAAGTACGTTACAAGAAGGCATCTGATATTCAGGTGGCAGGATTTGTGGCATTTTACATTCTGACTAAAGGAGAACATCCTTTTGGGGAAAAACGACACCGACTTGACAACTTACTCAATGGCAAACCAGTCGGCTTGAATTCTCTGAAAGATGATGCTGCGAAAGATTTGATTGCCTGGATGCTGAGTCACGATCCCAACGATAGACCGTCAGCCAATGAAGCGCTGAAACATCCGTATCTTCAGCCTCCGAAAcagcagtttaaaatgctgtGCATAGTAGGAAACCAGCGGGAGATCAAGACAGATGATGTCAAGTCGCATGTCGTGCGAACGTTGAATAGCGATCCCAATGATTGGCGAAATGAAATGGAACCCGATGTTCTGAAATATTTATCCACTGATTGTTTGAGTGGGAGAACATATCGTTATAGCCAGTCCTGGACGGACTGTTTGCGACTTATCCGAAATGTGAAGGAACACTGGGAAGATCGCCCAAGGCCGcgaactgaaatattttacattgtgGGAAATCCCCAGGAGTTCTTCCTCAACCTCTTCCCCAGTCTACCTGCAGAGGTACACAGAATTATCAGGTCATGTGATTGGAAAGAACGGGATGACCTCAAGGAGTACTTCATTTAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q559A2	Probable serine/threonine-protein kinase irlA OS=Dictyostelium discoideum OX=44689 GN=irlA PE=3 SV=1
Q557G1	Probable serine/threonine-protein kinase irlB OS=Dictyostelium discoideum OX=44689 GN=irlB-1 PE=3 SV=1
Q55DJ9	Probable serine/threonine-protein kinase irlD OS=Dictyostelium discoideum OX=44689 GN=irlD PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000864 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF00805 all species →	Pentapeptide	Pentapeptide repeats (8 copies)	Repeat	Interproscan
PF06479 all species →	Ribonuc_2-5A	Ribonuclease 2-5A	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR001646 all species →	Repeat	Pentapeptide repeat	Interproscan
IPR045133 all species →	Family	Serine/threonine-protein kinase/endoribonuclease IRE1/2-like	Interproscan
IPR010513 all species →	Domain	KEN domain	Interproscan
IPR038357 all species →	Homologous_superfamily	KEN domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13954 all species →	IRE1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004521 all species →	Molecular Function	RNA endonuclease activity	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0030968 all species →	Biological Process	endoplasmic reticulum unfolded protein response	Interproscan
GO:0036498 all species →	Biological Process	IRE1-mediated unfolded protein response	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0070059 all species →	Biological Process	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress	Interproscan
GO:1990604 all species →	Cellular Component	IRE1-TRAF2-ASK1 complex	Interproscan
GO:0004540 all species →	Molecular Function	RNA nuclease activity	Interproscan
GO:0006397 all species →	Biological Process	mRNA processing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000019206.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.