Detailed information of ENSAPQP00000019399.1 in Leptogorgia sarmentosa

Genomic Location: chr3:15553043...15561544
NR annotation: CAB3986280.1, receptor-type tyrosine- phosphatase delta isoform X4 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000972 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan
PF00530
all species →		SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF00754
all species →		F5_F8_type_CF5/8 type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000421
all species →		DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR001190
all species →		DomainSRCR domainInterproscan
IPR036772
all species →		Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR000519
all species →		DomainP-type trefoil domainInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46013
all species →		VASCULAR CELL ADHESION MOLECULE 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSAPQP00000019399.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP