Gene detail

Detailed information of ENSAPQP00000019773.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3985412.1, Ankyrin repeat and LEM domain-containing 2 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000021920

atgaagtattctGCAGCGCTCAAATTCAACATGGCGTCCGAAATAGCTTTTCTAACGGATGAAGAACTACGGACAAAATTACGTTCGTTTAACCTGACCGATGGCCCTATTACGAAGACAACAAGAAAACTCTTTGAAGCTAAGCTGGCAAGGGCCATGGGTCTCAATAAACAAGTCGATAAACCCGTTGAAGCTGAAAAACAAGAGGTCAATAATTCATCGGATCAGGGAACGATCAATATAACTGGACTCATAGAAAAAGGCATATCTGTGTGTAACGCAATAGGTACAAAAGAGGATAAGGATGATAAACAGGATACAGTGAATAAGCAAGTTTGTACATTTTATGGAGTTCGTCTGGataatgaaagtgaaagtgaaaatGTAGGCGCAAAATGTATTTCAGTGTTTACGGACATAACCGAAACACTTCACTGTGTTAACAAGAACAAAGGTGCTAGATTTCGACCTTTCAGCACCAGAAATGAGGCGGAAGCATTCGCATCGGGAAAACTACCCACGCCATCCCGGCAGCTTTCTCAGGAACTTTCCCCGGGCCCGGTTGAACCAACATCGGAGTACAAGACCCCCAAACGTGGCGAAATTACCAATTACCGTAAACTGATCGAAAAGGGAGAGGGTGATAGTGTCGCAAAGATCATTTATGGCAATCCGAAGTTTTTGATAAGTTCAGGTGATACCCCATTTATTATTCAGGAGGGATGCCATTATAACAGCATGCATGTTGCCGCCAAGGCAGGACACAGGGACATTTGCAAGCTGATTATTGAAACTCTCAATGACGATGAGTTTTGGAAACTTATCTATCCAGTCAAGGAGGACAGTGTGAATAATATCCAACTAAATAACAGAAGGAAAGCATTTCTCTTGGATTTGTATCTTAACACACCAGATAAGGGGGGTTGTGAAACTCCTTtacatttcgcatgtaaatTTGGAAAAGCGGATGTCGTCGAATACTTGTTGTCTTGCCCGGGTGTTGAAACAACTGTACGCAACAAAGAAGGAAAAACAGCAGAACAGTGCGGTATTTGCATTGATATTACGTTCATTCTTTGTTCGACAGAAAACGTATGCGTTCCGATATTACGCTCAGACGACAACTGCGCCTCCCCCAAAATTGGAACTCCGTGGTCTCCGAATCTCCGCGAAAACTACGAGGATGTCTTCGATGGAGCGAGTCCTGGTGAACCGAAGTACAGAGTTCGTGCATATGCTGGGCCTATGTCACCGCAGGAGGTACTATATCAATCTACGCCCGACAAGCAGGCAAAATATCGGAATATAAAGAGGAGCGACAGTGAGAAGGGCCTGGAACGAGTTGCAAGGTTAGTGGCAAAATCTCAGAACGTGTCATGGTGCGAACACTGGAAATTCTTAGAATGCTTTACCGACCTCTCGACGGAAGATGGGTTGgcaaaattagaaaaataCCTCAAGGAAAAGACCGAAGCGTACAGAACAAACGCGGGGAACAGTGTTCCGCTGAAAACACCGGTATCCAGCAAGTGCGCGTCGGTGAGGTCGCTTCGTGGAGTTTATAGTGGAGATGATGTTTTTGATGGCTCGGAATGCACGCCAAAATCTGATACAAACCAGCCGCGCGATATAAGCGCTACGCCTTGTTCAAGAACTAGGTACCCCAGCATAAAAAACTTTCGAAATCGGTTGAACTTAGACGAATCTCCGGAGAGCGGACAGAATACGGAAGGAGACGATGTAATGGACTTGAATAGTAACCTCGGAGACACAGACGTAAAAGAAGATGGTAAGGGTGACATTCAAACGAAGCCTGATATGGATACTAGTATTTGTGAGCAGCAGCAGCAAGCAAACGGGAAATACTGTAACAGTACATCGAGACTTCGACAGTCCACCGTTTCTCCGGATACTAAAGATTTATCCCCTGGCTTTTCCAAAACCTCGTTAGACATTTCTAATTGCTCCGAGGACTCGCTATCAGGGATGATTGAGGAGTTTCGGGCATTGAAACTGGATGAAAGCGCAAAATCCAAGCAAGAAAATGGATGTGCCAATAAGGTGTCTGAATCTTCACCCACTGATGACCGATGTGGgtgtgaaattgaaaacacgCAAAGGGAGGAGGATGTTAGCTTCTTCATTGAGGGGATCCAACCCAGTAAAGTGGATTTGGACGTCTTTCGCAgcataaaaacaacaacaattgATCCAGTTGTCTATCCATACGTGTCTCGTTGGCAGAAGATGGTGCGTTCTTTCTCAAAGACTACTCGACAGGCGTGGCCTAGTCCTGGATCGCCAAGGTACTATAAAACACGGCGGGGCATCGCGAAAACGCTAAGCTGCTAG

Transcript

ENSAPQT00000021920

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7TP65	Ankyrin repeat and LEM domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ankle2 PE=2 SV=2
Q86XL3	Ankyrin repeat and LEM domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ANKLE2 PE=1 SV=4
Q6P1H6	Ankyrin repeat and LEM domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ankle2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004842 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13857 all species →	Ank_5	Ankyrin repeats (many copies)	Repeat	Interproscan
PF03020 all species →	LEM	LEM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003887 all species →	Domain	LEM domain	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR011015 all species →	Homologous_superfamily	LEM/LEM-like domain superfamily	Interproscan
IPR051108 all species →	Family	DHHC palmitoyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12349 all species →	ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21412	ANKLE2, LEM4; ankyrin repeat and LEM domain-containing protein 2	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.