Gene detail

Detailed information of ENSAPQP00000020253.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028404608.1, prolyl 3-hydroxylase OGFOD1-like isoform X1 [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6DE73	Prolyl 3-hydroxylase OGFOD1 OS=Xenopus laevis OX=8355 GN=ogfod1 PE=2 SV=1
Q8N543	Prolyl 3-hydroxylase OGFOD1 OS=Homo sapiens OX=9606 GN=OGFOD1 PE=1 SV=1
Q5R4R3	Prolyl 3-hydroxylase OGFOD1 OS=Pongo abelii OX=9601 GN=OGFOD1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004011 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10637 all species →	Ofd1_CTDD	Oxoglutarate and iron-dependent oxygenase degradation C-term	Domain	Interproscan
PF13661 all species →	2OG-FeII_Oxy_4	2OG-Fe(II) oxygenase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005123 all species →	Domain	Oxoglutarate/iron-dependent dioxygenase	Interproscan
IPR019601 all species →	Domain	Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain	Interproscan
IPR051842 all species →	Family	Ribosomal subunit uS12 prolyl hydroxylase	Interproscan
IPR006620 all species →	Domain	Prolyl 4-hydroxylase, alpha subunit	Interproscan
IPR039558 all species →	Domain	Prolyl 3,4-dihydroxylase TPA1/OFD1, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12117 all species →	HISTONE ACETYLTRANSFERASE COMPLEX	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016706 all species →	Molecular Function	2-oxoglutarate-dependent dioxygenase activity	Interproscan
GO:0031418 all species →	Molecular Function	L-ascorbic acid binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006449 all species →	Biological Process	regulation of translational termination	Interproscan
GO:0019511 all species →	Biological Process	peptidyl-proline hydroxylation	Interproscan
GO:0031543 all species →	Molecular Function	peptidyl-proline dioxygenase activity	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24029	OGFOD1, TPA1; prolyl 3-hydroxylase /prolyl 3,4-dihydroxylase	EC:1.14.11.-	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.