Gene detail

Detailed information of ENSAPQP00000020461.1 in Leptogorgia sarmentosa

Genomic Location: :...
NR annotation: XP_028396923.1, tuftelin-interacting protein 11-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSAPQT00000022850

ATGGCAGACTCCGATAACGAAGTCGAAGAATTTTCTATAACGGATTATGATTTACAAAATGAGTTTTTCCCCGGGATGAAACGCCGTAAAATGACTAAAGAACAAGCAATGCTTGGTATCTGGGCAGGCAGAGActctgatgatgatgacgatgtaGGGgacaagaaaagaaaagcaaaCTATAGTATACCTTTACAGTTTGTTAGTGGTGGTGTTGTAAAGACAAAGGATAAAGATGCTTTTGGTGAGCTATCAAGCAATCATATTATGAGTATTAATAATACAGATTTTGCCTCATGGGAGCAACACACCAAAGGTTTTGGTACGAAGATGTTAAAAAAGCGCAGTCCTGATCTGTTCAATTCAAATCTGCAGGGTATTGCTACCCCAGTCGAGGCTTTCAAGAGAGGTGGTCGTGGTGCACTCAGCTATTATGGACcagaacaaaaaacaaaaaaacaggAGTTGCCGGAGGAGGATGTTGAGGAAGACGAGTTTCGTCAGCAATTAAGTCAATGGAGGAAATCTGATGTAAGTTTAGGGAACATTCTTTTATTTGTTGTGGATATGACAGGACGAGAAGCTAAGATATTGACAGGTTATGGATCGTTCGCTGCTCAGCACGCTAATCCTGAAGAAGAATCAACAGGTAGTGTATTTAACGAGCGTGCATTTTCAATGCCCGAACTGGAATACAACTTAAATCTTCTGTTGGATTTGAGTGAGTCAGAAATTGTTCAGGCAGACAAACAACTGCGTCATGAAAATGACTTGATGGTGAATTTAAAACACGAAGAAGAAAGACTCTCTAAAGAAATTGAACTGGAAGAGAGTGATATGAAACAACTGGTTGATGTTATGTCTTCAATTTGCAGGTGCAGACAACAAAGTACTGGAGCTTCTAATGAAGCGCTTTCATTACAAGACTGCGAAGTCCTTTTTGAAAAACTGCAAAACGAATTTGCAGAATTGTACAAGATGTACGAGCTAGTGACAATGGCTGTGCCTCTGGTTTTCCCAAAGATTAAAGAACATCTTGAAATGTGGAATCCACTTCAGAATCCAAGCTATGGTTTGGAGGTTGTGAAAAGATGGAAGAAATTACTCGAGGGAGACAAACCAAACTCCTTTACTCTATCGACTGGGCCATCTTTGGACCCAAAtagCATGGATACGTACGAAAGATTGATATGGGAAGTTTGGATGCCAGTTTTGAGAAGATGTGTGAGTGTATGGAATCCTCGTCATTCCGATGGTCTTGTAGAACTTATTGAAAACTGGCTACCTCTGCTCCCATCATGGATATTTCAGAATATTCTTGATCAAATACTACTGCCACGTTTACAGGCTGAAGTAGAAGCCTGGAATCCACTAACTGATCCTATTCCTATACATTCTTGGATTCATCCTTGGTTACCATTAATGGGTGAACGACTTGAAACGCTTTATGTTCCAATACGTCATAAACTAGCGATGGCATTAACAAACTGGCATCCATCGGATCCGTCTGCTAAGCTAATTCTCGAACCATGGATCAAGgTGTTTTCTAAGGGAACTTTAGATGCATTTGTACTTCGTTCAATATATCCCAAATTATCGCAATGTTTGTCAGAATTTGTAATTAATCCTCATCAACAACATCTTGAACCGTTTACCTGGGTAATGGCGTGGAAGAATATAATTccgtttcaacattttgtcaGTCTTttagaaaaacatttctttccCAAATGGATGCAGGTCTTGCGAAATTGGTTATACAATAAACCTAACTACGATGAAATCACTAAATGTTTATTATTGTGTGTATTTTTAGCTCAATTTAACCGTGGGTTGGACATGATGAATCAAGCAGTTTCCTCGCCAGAAAGTCTACAGCAACCTGGTGCACGAGAGAATGTTGCTTATCTAACAAACACGGAGAGAAGAAATACCGCAGAACAAAATATACCAACGAACTTCAGAgatctgttggaaaaaatgGCGAATGAATACGATATCTCGTTTCTACCAATCACAGGGCGACGTCACGAAGGCAAAGCTTTGTATTCGTATGGCAAACTTACGATCTTTATTGAACGGGGAGTTGTTTTTTATCAAGCTCCAAATGGCAGCTTTAATCCTGTGTCTATAACGAACCTTGTAAATATGGCCAAGTAA

Transcript

ENSAPQT00000022850

Protein

Uniprot

Uniprot term	Description
Q5ZII9	Tuftelin-interacting protein 11 OS=Gallus gallus OX=9031 GN=TFIP11 PE=2 SV=1
Q66J74	Tuftelin-interacting protein 11 OS=Xenopus laevis OX=8355 GN=tfip11 PE=2 SV=1
A4UMC6	Tuftelin-interacting protein 11 OS=Monodelphis domestica OX=13616 GN=TFIP11 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07842	GCFC	GC-rich sequence DNA-binding factor-like protein	Family	Interproscan
PF12457	TIP_N	Tuftelin interacting protein N terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022783	Domain	GCF, C-terminal	Interproscan
IPR045211	Family	TFP11/STIP/Ntr1	Interproscan
IPR022159	Domain	Tuftelin interacting protein, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23329	TUFTELIN-INTERACTING PROTEIN 11-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000390	Biological Process	spliceosomal complex disassembly	Interproscan
GO:0071008	Cellular Component	U2-type post-mRNA release spliceosomal complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13103	TFIP11; tuftelin-interacting protein 11	-	Spliceosome	ko03041	deepkoala