Gene detail

Detailed information of ENSAPQP00000020913.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3978605.1, Hypothetical predicted protein [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000023425

ATGGAAAGGcgagaaagaaagaaagaccTCTCCACAAACATGAATCACGAGGCAGCAATGGATAGTTTTTTGGGTAAACTTGGCCTGTACAGAAAACCCATTGCAAAAGATGGATCATGTTTGTTTAGAGCTGTTGCTGAACAAATTTTTAACTGTCAAGCAGAGCACACACGTGTGAGGAAGGAATGTATTGAATacatgaagaaaaataaagacAGATTTGAAGCGTTTGTGGAGGGGCCTTTCGATCATCATTTATACAACATGAGAAGCCAAAAGGAATGGGCAGGACAAGTTGAAATCCAAGCTCTTTCCATGATGTACAAatgtGATTTTTTAGTTTACAAAGATATAAATTCTGTTCCTATAAAGGCCACTGAGAATGACTATGATAAAAAGATCATCCTCTGCTATTCCAATGGAAATCATTATGATAGTATTTATCCTCATTCTCACAAAAGTAATCTTGGCCTTTGTCAATCCATGGTATTTGAATTGCTGTATGGTCAAGTTTTCCCATTGTTGATGATGAAAGATCCTGAAAATAAAGCAACAAGTCCTACAGATTCCACTGATAaacaaaatgattttggtGAGAACGTTGTGGTAAATGGGTATGGTACTGGTGGCAGTGAGAATGGTGATGAAAATGATGGTTGGACCACAGTGAAAAGCAAGAAACAAGGAAAAATGatgacaaaaaatcaaaaaaatgTAGAGCAATTCTACTCAGAGCAAGCGCCATTGTCACCAGCATCATCTAAATTAAATTGGGAAGTTATGAGGTCAATTGATCCTGACAGTTACAGAAATATTGAGCTGGAAGTTTGGGAAGAATGCAGAAAAGAGCAACAACAGAAAGACCAAGCAGTTGCTGCGACATTCCAGTTTAAGAAAGGCGACCGATGCCAGGTGAAACACCCATTTGATGAAAAGTTGTATTTGGCATTTATTGATGATGTCTTCGACGAGAAATGCAAGATTTGGATTCCTGAATTAAAAGAAAGAAAAGTGGTGGCATTTTCCCGACTTAAACCGAAGGAACAGAACCCTAATTCTGGTTACCGAGAATTGTCAGGCTACTACAGGAAGCAAGAGAACTCCCAAGATAATACTAATACTCCACGTGGAGGCGATGATCAGAAAGGTGGTCGACGAAGAAAATCGAATAGGAATAGAAAGggAAATGTTGGTGACGGCAACGAGAGAAGTCAACAAGAAGTGTCTATGCAGGATGATGCTTCTGGTCGACAAAGAGGAGATAAAAACAGGCGACGTCGAAACAACAGTAATACTGCTAAACCTAAAGAAGACAAAAATGAGTTCAACCAGAGAGAAGACGGAAGTAGTGCACAGAATCAAGGATCAGTTGAAGTGTCCTCATTCCCTGCTCTTCCCAAACGGGATGATCAACCAGCAACGGAAAAAGCAAAACCCGATTCTGACAACAATCCAGATCCCGCCACATTTTGGAGAAAGCGAAGAGAAGTAGAACAAATGGAAAAAACGACAAAGGAAGACAATGTTTTGGATTCAACTCCCTCCACTGTCAAAACTCCGCCTAGTGAGGAAAACGAAAGAAATGTCAAAgatgacattgtagaaagtcAAGTAGAACACGTTGAAAATGAATGGTCTCAATCAGTACCTGAACAAATGCCTGAAGAAATAACTCCAGATATCCCTACTCCTGAGAAAACATCCCCAACGTTCCCCAAGGAAACACATCCAGAGTTACAACAAGAGTTACCCAACGAAATCTCTCAAGAAGAAATACCCGAGGAAGTACAACATGAAAAACCTTCAGGAATGGCCGAGGAACGCAAAGTAACGCCGTTTGTGGTTGAGAAACGTGTTAATTGGCTTGATTTGAATAATGACATTCGTACTAACTATGAAAACATGGATacaaacaatgaaaaacaaagcAACGAACAGACAGCCAAACCCACTTACATGAATAACGGACCGCCCCTGAAAGAAACTGTCATTGAAATTGAAGACGAAGAAACTGTAAACGAAGAACAAAGTTATAATTCAATGAATCCGAATTTATTTGATACACCAAGGAACTTTGAAATTCTGAAGAATCCTGACAGACAAGAAGTTCAAGTTGAACCGTCAACTACAAGTTCATGGTATGGCGAGGCAGAAACTGCAGTTCTTGGAAATGGACCTACTGCCGAACCCGTAATTAAGgaaggaaaagaATCACCTGTCTTTCAAATGGCTAACCACACAGTACAAGGCAACGATGCACCACCATCTCCACTAGTTAATCAAAACGAAAGTGAACAAGAGAGAGAGATTTCACCAACTGCAACCCCCGATCACAGCAACCGTCATCCGATTGATACTgcaacaatacaaaatgagATTCTTAATGGAAATATTACTTATTCCAGCGACCCTGAAGGCAAAGATTTACATAAAGATATTGAAGTTGTCCGTTATTTGTACAACTATGGCATTTATATGCATCATTATGTGAACAGCGTGTTTCCAGGAAGTGCTCCTATCAGTCCAATGTATCCAGTAATGAATCCTAACGCGGTGTATGCTATGCAACAGACTTATCAAAATCGAGCAATGATGATGCCACAGAACATGTATCCACAAATGCAGCAATCAACACATAACGAGAATCAGCAGAGTCCAGGTGAAGAAACACGAGAAAACAATGATAGTCCTGGGTTCAAAACATCCATTTCTATGCAGCAGTCCCCTACGTATCACACCAGCCACGCAATGGCACAGCAAGCTATGTTTAACATGAACTATGGTCAAATGTTTCCCGCTGCTGGTCGTCCATTATATTCCAACTATTCCAATATGTTCCCTCGCACAGCATTCCCCAGATACTCACCCAATAAAGTAGGTTACCGGCCAACAGGGAGGAAGCACAACAACCGGTATATTAGGAATGACAATCAGCCTAACATGAAGTTTCATAATCTGCAAACTGGTTATGGACAGTACTCAAAAGAAACAGAACAATAA

Transcript

ENSAPQT00000023425

TTGAGACTTTCACATCGTTCCTTTGCTTTTGCCAACAACATGGCTTTTGGAAGAAGTTACCTCGTGTACTCTAAAAACGTTATAAACTCATGTTAAAGGCTTTGATTTCAAGCCATAAGTTGTTCAAAACATGGTCGTGAGGTGAATTAAACATAAATGGAAAGGcgagaaagaaagaaagaccTCTCCACAAACATGAATCACGAGGCAGCAATGGATAGTTTTTTGGGTAAACTTGGCCTGTACAGAAAACCCATTGCAAAAGATGGATCATGTTTGTTTAGAGCTGTTGCTGAACAAATTTTTAACTGTCAAGCAGAGCACACACGTGTGAGGAAGGAATGTATTGAATacatgaagaaaaataaagacAGATTTGAAGCGTTTGTGGAGGGGCCTTTCGATCATCATTTATACAACATGAGAAGCCAAAAGGAATGGGCAGGACAAGTTGAAATCCAAGCTCTTTCCATGATGTACAAatgtGATTTTTTAGTTTACAAAGATATAAATTCTGTTCCTATAAAGGCCACTGAGAATGACTATGATAAAAAGATCATCCTCTGCTATTCCAATGGAAATCATTATGATAGTATTTATCCTCATTCTCACAAAAGTAATCTTGGCCTTTGTCAATCCATGGTATTTGAATTGCTGTATGGTCAAGTTTTCCCATTGTTGATGATGAAAGATCCTGAAAATAAAGCAACAAGTCCTACAGATTCCACTGATAaacaaaatgattttggtGAGAACGTTGTGGTAAATGGGTATGGTACTGGTGGCAGTGAGAATGGTGATGAAAATGATGGTTGGACCACAGTGAAAAGCAAGAAACAAGGAAAAATGatgacaaaaaatcaaaaaaatgTAGAGCAATTCTACTCAGAGCAAGCGCCATTGTCACCAGCATCATCTAAATTAAATTGGGAAGTTATGAGGTCAATTGATCCTGACAGTTACAGAAATATTGAGCTGGAAGTTTGGGAAGAATGCAGAAAAGAGCAACAACAGAAAGACCAAGCAGTTGCTGCGACATTCCAGTTTAAGAAAGGCGACCGATGCCAGGTGAAACACCCATTTGATGAAAAGTTGTATTTGGCATTTATTGATGATGTCTTCGACGAGAAATGCAAGATTTGGATTCCTGAATTAAAAGAAAGAAAAGTGGTGGCATTTTCCCGACTTAAACCGAAGGAACAGAACCCTAATTCTGGTTACCGAGAATTGTCAGGCTACTACAGGAAGCAAGAGAACTCCCAAGATAATACTAATACTCCACGTGGAGGCGATGATCAGAAAGGTGGTCGACGAAGAAAATCGAATAGGAATAGAAAGggAAATGTTGGTGACGGCAACGAGAGAAGTCAACAAGAAGTGTCTATGCAGGATGATGCTTCTGGTCGACAAAGAGGAGATAAAAACAGGCGACGTCGAAACAACAGTAATACTGCTAAACCTAAAGAAGACAAAAATGAGTTCAACCAGAGAGAAGACGGAAGTAGTGCACAGAATCAAGGATCAGTTGAAGTGTCCTCATTCCCTGCTCTTCCCAAACGGGATGATCAACCAGCAACGGAAAAAGCAAAACCCGATTCTGACAACAATCCAGATCCCGCCACATTTTGGAGAAAGCGAAGAGAAGTAGAACAAATGGAAAAAACGACAAAGGAAGACAATGTTTTGGATTCAACTCCCTCCACTGTCAAAACTCCGCCTAGTGAGGAAAACGAAAGAAATGTCAAAgatgacattgtagaaagtcAAGTAGAACACGTTGAAAATGAATGGTCTCAATCAGTACCTGAACAAATGCCTGAAGAAATAACTCCAGATATCCCTACTCCTGAGAAAACATCCCCAACGTTCCCCAAGGAAACACATCCAGAGTTACAACAAGAGTTACCCAACGAAATCTCTCAAGAAGAAATACCCGAGGAAGTACAACATGAAAAACCTTCAGGAATGGCCGAGGAACGCAAAGTAACGCCGTTTGTGGTTGAGAAACGTGTTAATTGGCTTGATTTGAATAATGACATTCGTACTAACTATGAAAACATGGATacaaacaatgaaaaacaaagcAACGAACAGACAGCCAAACCCACTTACATGAATAACGGACCGCCCCTGAAAGAAACTGTCATTGAAATTGAAGACGAAGAAACTGTAAACGAAGAACAAAGTTATAATTCAATGAATCCGAATTTATTTGATACACCAAGGAACTTTGAAATTCTGAAGAATCCTGACAGACAAGAAGTTCAAGTTGAACCGTCAACTACAAGTTCATGGTATGGCGAGGCAGAAACTGCAGTTCTTGGAAATGGACCTACTGCCGAACCCGTAATTAAGgaaggaaaagaATCACCTGTCTTTCAAATGGCTAACCACACAGTACAAGGCAACGATGCACCACCATCTCCACTAGTTAATCAAAACGAAAGTGAACAAGAGAGAGAGATTTCACCAACTGCAACCCCCGATCACAGCAACCGTCATCCGATTGATACTgcaacaatacaaaatgagATTCTTAATGGAAATATTACTTATTCCAGCGACCCTGAAGGCAAAGATTTACATAAAGATATTGAAGTTGTCCGTTATTTGTACAACTATGGCATTTATATGCATCATTATGTGAACAGCGTGTTTCCAGGAAGTGCTCCTATCAGTCCAATGTATCCAGTAATGAATCCTAACGCGGTGTATGCTATGCAACAGACTTATCAAAATCGAGCAATGATGATGCCACAGAACATGTATCCACAAATGCAGCAATCAACACATAACGAGAATCAGCAGAGTCCAGGTGAAGAAACACGAGAAAACAATGATAGTCCTGGGTTCAAAACATCCATTTCTATGCAGCAGTCCCCTACGTATCACACCAGCCACGCAATGGCACAGCAAGCTATGTTTAACATGAACTATGGTCAAATGTTTCCCGCTGCTGGTCGTCCATTATATTCCAACTATTCCAATATGTTCCCTCGCACAGCATTCCCCAGATACTCACCCAATAAAGTAGGTTACCGGCCAACAGGGAGGAAGCACAACAACCGGTATATTAGGAATGACAATCAGCCTAACATGAAGTTTCATAATCTGCAAACTGGTTATGGACAGTACTCAAAAGAAACAGAACAATAAGGCCGGTGAAAACAAATTGATTCAGCTAACTCTCAAAACTTGATCATGATGATTTCTATTATTTGTCGAATGAGAAAACAACTTTTAGTTAATATTGTGTGTCTTTCCATATAACTTTTATATGGAGGTAAACGAAAGGTATCTAAACAGTGTTGAACTCAGAGTTGAAGTAAGATGTTATTAATTAGGAAAAAGACTCAAGGTGTTAGTATCCCTGGCGCTGTTTTCCAACAAGCGAATTTGTTTGCGCAAATCAAAAACGAAAATTCAGCAGCGTAATTAGGCTGGAGCAAAGTTCTCCGCAAAAAGTGGCAAGCGTTTCCACGAATTTACGCAAACAAATTCGCCCATGGTAAAACAGCGTAAAGGAGTAATATTCCTGTAATACATTATTTGGAAACTTTAACATATGTTGTGTTACGTTCACATTAAGTCCCAGGTATACTACTTTAGCGATACCAGTGTGCGACGCCATTTTGATTGTCGCGCACCGTGTAGTGAGGTCTGGTCTTAGATACGTGCAAAGTGTATGTTGTAAATCAGTTTATTTTTAAGATTAAAGTAAATTATATATCTAccatttgtatatttgtagtCTGTTCTTTGTgtgaataaatatttctgC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B2RRE7	OTU domain-containing protein 4 OS=Mus musculus OX=10090 GN=Otud4 PE=1 SV=1
Q01804	OTU domain-containing protein 4 OS=Homo sapiens OX=9606 GN=OTUD4 PE=1 SV=4
Q9NP73	UDP-N-acetylglucosamine transferase subunit ALG13 OS=Homo sapiens OX=9606 GN=ALG13 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003653 (this species only)
Ubiquitin family	DUB\|OTU\|OTU · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02338 all species →	OTU	OTU-like cysteine protease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049770 all species →	Domain	Protein ovarian tumor locus, Tudor domain	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR003323 all species →	Domain	OTU domain	Interproscan
IPR050704 all species →	Family	OTU domain-containing ubiquitin thioesterase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12419 all species →	OTU DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0016579 all species →	Biological Process	protein deubiquitination	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13718	OTUD4; OTU domain-containing protein 4	EC:3.4.19.12	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.