Detailed information of ENSAPQP00000021249.1 in Leptogorgia sarmentosa

Genomic Location: :...
NR annotation: XP_028396216.1, E3 ubiquitin-protein ligase SHPRH-like isoform X1 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q149N8E3 ubiquitin-protein ligase SHPRH OS=Homo sapiens OX=9606 GN=SHPRH PE=1 SV=2
Q7TPQ3E3 ubiquitin-protein ligase SHPRH OS=Mus musculus OX=10090 GN=Shprh PE=1 SV=1
Q9FNI6DNA repair protein RAD5A OS=Arabidopsis thaliana OX=3702 GN=RAD5A PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF21325SHPRH_helical-1stE3 ubiquitin-protein ligase SHPRH, first helical domainDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR048686DomainE3 ubiquitin-protein ligase SHPRH, first helical domainInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR052583FamilyATP-dependent Helicase/E3 Ubiquitin LigaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45865E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15710SHPRH; E3 ubiquitin-protein ligase SHPRHEC:5.6.2.-
EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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