Gene detail

Detailed information of ENSAPQP00000021616.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028402765.1, uncharacterized protein LOC114525576 [Dendronephthya gigantea]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

ENSAPQT00000024318

ATGTTACAGGCTTACAGCGAATTGTTCTCTGATCAATACGCCGaaagaatcctaaccctaatcACATCTGTTGGAGAAACGAAGACAAAGGCACTCCTGAATGAAGTCGCAATTTTACGTGGACCAGTTTGCAAAATATCGAAAGCCCTTCCTGCCTTGTTAAAGGAAAGTCTTCAAGCTCATGCCACCAACACTGCACTCATTGAGGAAGGTAGACCAAAGATAAATTATGAAGAGTTACTGCAACGAGCAATGGAACGTTCATGGTTTCTACGAGAGGTTTGCAAAGTACCAAAACAGTCGAGAATCGGGTTGCTTCTCGAAAACTGTGTAGAAACAATCGAATATGTTCTTGCTTCGGTTTTCTCAGGATTAGTTTACGTTCCTTTGGACGTAGATTATCCGAAGACGCGTCTCGAACACGTCTGCAATGGGTCGGAGATAAAAGCTATCGTCTTTCAGAAGTCATACATTGGGGTGGCCAATTACCTTCAGTGGGCTTGTCCCAGCGTTCAATCAATAATTTGCGTCGATTCGCAGGATTTCTTCGCCATTCAGGATGTGGTGGAAAATCCGTTGATGGAAGTTGAGTTGTGGAACTGGGTGGCAAAGAGTGCAAAAGATGACATCCAAAGTGGAGGGTGGAAGAGTTCTTACACTGGAGAGCATATGTCTGCCAAAGAGGTTGAGGAATACGTCGACAATGTTTTGATGAAACTAAGAGGCTACCTTAACTCCACTACTCGTGTGCTCGAGATTGGCAGCAACTCGGGACTAATCGTCCTGAAACTCTGTCCACTGGTTGGTCATTACGTCGCCACGGATCTCTCCGAGGTAGCCACGAAACGCCTTATTGCCAACGTGGAAAGGGAAAAGGTGACGAATGTTGAAGTGTTTTGTGCCCCTGCTCACCAAGTGGAACCCGTGCTGCAAGGAAGAAAGTTCGATCTGATCATCATAAACGGGGTGATACAATGTTTTTCCGGCTACAACTACTTACGCAAGGTTTTCAAAGACTGCGAAGAGCTGCTAGCCAAAGATGGAGTCATCTTCTTAGGTGATATCGTAGATCTGGACCTCAAAGACCAACTCATACAGTCTCTGAAGTCATTCAAAAAGGCCCATCCAGAGTGTAGAGTGAAGATCGACTGGAGCAACGAACTGTTCCTGTCCCGAGCCTTCATGCAACATTTGTGTGATTCTTCAAAGGCTCTAAAACGGGTAACGTTCTCAAGAAAACATCATACCATAGCCAACGAACTTACTGAGTTTCGATTCGACGCACTGTTCACCAGCACGAATGATTGCCAAACATCATCTGAACACGCAGTGAAAAAGCAGGTCTTTGCGATGCAAGATGTAACCAATGCCGTGAAAGCTCAAGATAGAAATTCCTTACAGGAGGTCGTTTCAGAGTGGTCACGTGAAGTTCAACTCGAAGACGAAGCATACGTGCTGTATACTTCTGGAACTACAGGAACTCCCAAGGGTGTGGTCATTGGCCATGAAGCGTTGGTTAACTACGTCACATGGGCAGCGAAAGCGTATAAATTTAATTCGACAACAATTACGCCATTCTTCGCTCCTCTCACGTTTGATTTTACTGTAACGAGCATTTTCCCTCCCCTGTTAGGCGGAAGTATTATTCAAATCTTCGAGCAATTTCGAGAGTCGTACCAAACTCTGGCTAATTCAACCGATATCACGACGGTAAAGTACTCCCCTCTTCAACTCGACACGATTTTGTCCACATGTGCCCGACCACTCAGCGCTTCCATCTTCATTTTGGGTGGCGAAAAATTAACATCTACACTgctggaaaagttgaaaaggaaTAAATGTGACGAACCATTCGTGGTTTGGAACGAGTATGGCCCAACGGAAGCCACTGTGGGTTGCGTAGTGCGATGTTTGAAAAGCGACGAAATACCTATGAAAGAAAACGAACACATTCCGATTGGCAAGCCAATCGATAACGTAACAGTAGGTGTCGTTACAAATCAGCAAGATCTTCTTCCTCCAGGAGCAAAAGGTTTTCTAGCCATTGGTGGAAAATGTCTGTGCCTTCATTTTGCTGGAAATACCGCCTGTACACATCAGAAACAACACGGGTCCTTGATGGCCTCGTGTTTGGGAAGACCGGGCGAAGAAATGCTGCTGACAAAAGATATCGTTGAACTAGCACCATCGTCTGGAGAGCTAATATATTTCGGGCGTGATGACGACTCTGAGGTAACGAAAGTAGACGGTGTAAGAGTTGACTTGCTGGAAGTTCAACACTTGATAGAGGCTGATCCTGCGGTTGCAAGTGCGTGGGTATCCACATTCGTCTACGAGGGATACACTTTGTTGGGAGCCGCTGTTAAATTCGATGGTGGTAAGGAGTGTGGCGACGATGCTTGGAAACAACAATTGATGTCATCTCTGGCGCAAATTCTTCCCGTTAGATCTATTCCCAAAGTCTTCGTTCAACATTCTACCGCACCAACAAACAAGAATGGCAAAAAAGATGTGGATTATTTGCAAAAACTGTTCCTCGCAGAAATCATGGCAAAGAGAAGCAGTTCTTCCGATGTGATGAATACAATAACGACGTCTCGGTATCTCGAACAGATTGCAAATCTCCAACGAATATGGCAAAGCATTTTACCAATCGATCATTTGCCCAAACCTGAAGATGATCTTTTCTTCGACTTGTCAGGCAACTCTTTGCAGGCCATGAACCTGGTGCGAAAGATGCGAGATGAAGGCTTTCAAGTGTGTGTCGCCGACATTTTTCAGAATCCGAGCATTCAAAGACTAGCACCAATCCTGGAGAAGAGAGGAAAAAAGAAGTGA

Transcript

ENSAPQT00000024318

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O30409	Tyrocidine synthase 3 OS=Brevibacillus parabrevis OX=54914 GN=tycC PE=1 SV=1
O68008	Bacitracin synthase 3 OS=Bacillus licheniformis OX=1402 GN=bacC PE=3 SV=1
Q9R9J1	Mycosubtilin synthase subunit A OS=Bacillus subtilis OX=1423 GN=mycA PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0016905 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08242 all species →	Methyltransf_12	Methyltransferase domain	Domain	Interproscan
PF00550 all species →	PP-binding	Phosphopantetheine attachment site	Domain	Interproscan
PF00501 all species →	AMP-binding	AMP-binding enzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042099 all species →	Homologous_superfamily	ANL, N-terminal domain	Interproscan
IPR036736 all species →	Homologous_superfamily	ACP-like superfamily	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR013217 all species →	Domain	Methyltransferase type 12	Interproscan
IPR009081 all species →	Domain	Phosphopantetheine binding ACP domain	Interproscan
IPR000873 all species →	Domain	AMP-dependent synthetase/ligase domain	Interproscan
IPR020845 all species →	Conserved_site	AMP-binding, conserved site	Interproscan
IPR045851 all species →	Homologous_superfamily	AMP-binding enzyme, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44845 all species →	CARRIER DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

No Gene Ontology signature was detected for ENSAPQP00000021616.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000021616.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.