Gene detail

Detailed information of ENSAPQP00000021716.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4015076.1, ras association domain-containing 1 isoform X1 [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000024440

ATGAGATGCAACAGCAAGTGGCCAGCAACACGAGCCTCGTTTTCAGGCACTACGTAAACAATATTGTTTGCATTTCAGTACAAAGAATTTTAGCGAAGTGGAGAGTTGATAATCTAAATAAAACTGTTAAATAAAGGCATATGTCACTTCTGTTTTCCATATTCGGTGAGATCATTGCATTAATAAAGGAAATTCGTTAGGAGGATTAAAGTAAAGAGTCTTTGTTGGTATGTAAATACGTGATGGAAGAGGACTTAAGAATGGCTACGCTGAAGGCAGGAGAGGTTTACAAAGCTGGAGCATTATATCGGTCTCATTCAGTcccagaaaatatttcaggcGAACATGCTTCAAAACAGTCATTCAATGTCATTAAAGACTTCATTTCAAACTTTGGTCACTGGCGAGCTAACAAGCAAAGGAGAAAATTAGTGAGCAAAAGAAGCATACCAGAAAGTGATAACGTTGAATTTGACCTACATGATATAAAGCGAGTCAAAGACGCTCATAAACGGCTTGAAGGCGGTGGGCATGTGTTTGTAGCTCATTCTGATCACTACATAACATGGTGTGATTTGTGTGGGGAAACTATTTGGGGTTTTGTAAAGAGAGGAGTTCGTTGTCAAAGATGTAAATACACATGTCATCTGCGTTGCAAGGATGAGGTGTTGTTGGAGTGTGATGGAGGACTCATTCGAGATGCTAAAGAAATGAGCCGAGAGGAAATCACTTTGAAAACTCTGGAAATATTAAGCCAGGGAAATGTGAAGAAAAATGCGCCAGCAGTTTTACCCAGTGATTTGCCGCCCGATGACTTGCTAGCAATGATTGAAGAATTTAACAAAACCAGTCATGGCCTGATTATGACACTGAGTTCCAACTCatcaaatgacgtcatctttCAAGGGTTTATACGGGTAGCAATGAACCTTTTACGTCCAATCAATATCGTTGCTGGTGAAAGACCGTTATCTATTTTTGAAACGGTGTCTTGGAGAAGGGAGGGTAGTGTCAAAGGTTCAACTTCGTCAAAGCGAACAAAGACGTCGTTTTTTCTGCCTCCTAACACAATGAAAGCTCTTCATATTACCAGTGATACCACCGCACAACAAGTAATAGTTGCACTTCttaagaaatacaaaatctCCGATCATCCCAGGAAGTTTGCTCTTTACGAGAGATATCAAGATGACGATAATGTCACATTGCGTAGGATTGCTGACGACGAAAAACCGTTAGTACTACGTTTGATATGGGGAGGAGCTGATAGGAGTCATTCTTTCTGTTTACAAGAAAACGAAACTGGCGATATCATGTGGGAAGCATTCTCAATACCGGAACTACAAAATTTTATCAAGATCTTGGAAATGGAAGAAAAGGAATATGTTAAACGGGTGTTGACGAAATATCGTGTTTATCGTGACCAGCTTGAAGAAGCGATGGCTGAAAGGAAAGCAAAGTCAGCCACGAGTCAGTGATCAGAACATTTTTCGTGTACACAAActagaacaataaaaataccatATGGTCGCATCACCATTATCAATGGCATACAAATGCAAGTTCGTTAGAGTAACCATTTCTCAATGGTTTTTAAACCACGGGGAAGGCTATGGTTACTACTAATTGGGCTACTCCTATACTACTTTAACTGCATTCTATTTTCTCATTGGCTTCTAATCTTGTCCAGTCGTCAAAGCTGAGGCTGTTTGTGTCAACGATGTTTGAAGAAATATGCCTGTTTCTTATGCCAATTTTTTTGGCGCTTTTTTTCTGGGGCatacatgaaataaaattattctttATTGTATAGATTAAAAAGACAGTCAACATCGGGCAAAAGTCTTTAAGaactatttatattttatatgtgTCATATATGTGCAAATATTATATATCGTGTTTTAGTACCATGCATGACGAAAAGACCGCTTTGCCTCATATCGGTGTTTTTATATGTTTATGgataaaaaatgtaacttATGGCGgcctggtcaaacgaggacgGGTCACTTGACTGAAATATGAATCGAAAGCATGAGTAGAGCAAagctctcatcctcgtttgatacACGAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99MK9	Ras association domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rassf1 PE=1 SV=1
Q9NS23	Ras association domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RASSF1 PE=1 SV=1
Q22744	Ras association domain-containing protein 1 homolog OS=Caenorhabditis elegans OX=6239 GN=rsf-1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005443 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00130 all species →	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan
PF00788 all species →	RA	Ras association (RalGDS/AF-6) domain	Domain	Interproscan
PF16517 all species →	Nore1-SARAH	Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033614 all species →	Family	Ras association domain-containing protein 1-6	Interproscan
IPR002219 all species →	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR011524 all species →	Domain	SARAH domain	Interproscan
IPR000159 all species →	Domain	Ras-associating domain	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR046349 all species →	Homologous_superfamily	C1-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22738 all species →	RASSF	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000021716.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.