Gene detail

Detailed information of ENSAPQP00000022616.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: ALG96653.1, cyclooxygenase [Gorgonia ventalina]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000025449

TAAATCCCTGTTGTTCTTTCCCATGCGAAAATGGTGGAGTATGTGTTGATGATGGCGATGAATACACATGTGATTGTACAAGGACTGGATACTATGGAGTTGACTGTGAAAAACcTTCTTGGAAAACGTGGTTTGCATCTTTCTTCAAAATTAGGGAGGAAACAAAGCATTATATTCTCACGCATTTTACCTGGTTTTGGTGGATTGTGAACAATGTAAATTTCATACGAGATCCTGTGATGAAGGCTGCCTACCTTTCCCGCACCGACTACGTTCCTGTGCCTCATGCTTATACAAGTTATCACGAGTATCCAACTATGGAAGCACATTACAACAGATCTTATTACGCACGAACACTTCCTCCAGTACCTAAGAATTGTCCAACACCATTTGGAGTTTCtgggaAAAAAGTACTTCCCTCGGCGGAAGAAGTGGCCAACAAGTTTTTGAAGCGACAAAAGTTTAGAACAGATCATACAAACACATCATggcttttcatgttctttGCTCAACACTTCACTCATCAATTCTTTAAGACAGTATACCACAGTCCAGCTTTTAGTTGGGGAAACCACGGAGTCGACGTTTCCCACATATACGGTCAAGGCATTGCGCGGGAGAATAAATTGCGAAGCTTTGAAGGTGGAAAAATAAAATCTCAGATTATAAATGGTGAAGAATATCCGCCGTATTTAAAAGATATTGACAATTTAACAATGCAATATCCTGAAAATACACCTGACGTGCAAAGATTTGCCTTGGGTCATCCCTTTTATGCCATGTTGCCGGGACTTTTCATGTATGCGACCATTTGGTTAAGGGAGCACAACCGTGTTTGTACTATATTGAAAAAAGAACATCCGCACTGGGATGATGAGAGGTTGTACCAAACTGGAAAACTTATCATCACTGGAGAATTGATCAAAATTGTCATTGAAGATTATGTAAATCATCTCGCTAACTACAATATAAAGTTGAAGTACCTACCTGATGTATTGTTTGGCGAGGGTTATGATTATGACAATCGAATTCACTTGGAGTTCAATCATATGTACCATTGGCACCCATTCAGTCCAGATCAGTACAATATAAATGGCACAACATATTCTATCAGCGATTTTATGTACCATCCAGAGATTGTTGTTAAACATGGAATGAGATCCTTCGTGAATGCAATGTCTAGTGGTTTATGTGGAAAGATATCACATCATAATCATGGAAAGTATACATTGGATGTTGGTGTTGCAGTTATCAAGCATCAACGGGAATTAAGGATGCAGTCATTCAACAATTATCGTAAACATTTTGGCTTGAAACCTTACGAATCATTCCTAGAAATGACCGGTGATTCGAAGATGGCTGCCGAGTTAGAAGAAGTTTACGGAGATGTCAATGCGGTTGATCTGTATGTTGGTTTCTTCATGGAGAAAAGTCTTCCCACTTCTCCCTTTGGTATCACTATGATTGCTTTCGGGGCTCCATATTCTATAAGAGGTTTACTATCCAATCCCGTATCAAGTCCAACATATTGGAAACCTTCAACATTTGGAGGAGAAGTTGGTTTTAACCTAGTAAAATCAGCTACTCTGAAAAAgttgttttgtcaaaacataTCAGGAAAATGTCCTCTTGTAACCTTCACAGTTCCGGATCAAGTTGCTCGTGAAACCCGAAAGATCTTAGAAACAAGCACTAAAGACGAACTTTAGACAATTTTACCATCATAACTTTGTTTTCTACATTTCCAttatttgttcaatttttttagaGACTTAGAGTGCTATGATTCTTTCAGTATTattaataaagttagtttaaaAACGTTTCCTAGTCGAATTGGTGCACTATCTGAGGCTACTAGTTCCGCTCGATCATTTACAAGCACGTTTtacgagaaaaaaaaacacttctGGATGCAAACTACTTCTGCTCTTTCTGGAACTCCATGAATGCTTGAGTTTAGACCAAGAAAaagctttttgttttttcaattgTACTTTACGAATTTCAAAATCGTTCAATTCTTCTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O19183	Prostaglandin G/H synthase 2 OS=Equus caballus OX=9796 GN=PTGS2 PE=2 SV=1
O62698	Prostaglandin G/H synthase 2 OS=Bos taurus OX=9913 GN=PTGS2 PE=2 SV=2
P79208	Prostaglandin G/H synthase 2 OS=Ovis aries OX=9940 GN=PTGS2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0022376 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03098 all species →	An_peroxidase	Animal haem peroxidase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019791 all species →	Family	Haem peroxidase, animal-type	Interproscan
IPR050783 all species →	Family	Oxylipin biosynthesis and metabolism	Interproscan
IPR010255 all species →	Homologous_superfamily	Haem peroxidase superfamily	Interproscan
IPR037120 all species →	Homologous_superfamily	Haem peroxidase domain superfamily, animal type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11903 all species →	PROSTAGLANDIN G/H SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004666 all species →	Molecular Function	prostaglandin-endoperoxide synthase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016702 all species →	Molecular Function	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	Interproscan
GO:0019371 all species →	Biological Process	cyclooxygenase pathway	Interproscan
GO:0043005 all species →	Cellular Component	neuron projection	Interproscan
GO:0004601 all species →	Molecular Function	peroxidase activity	Interproscan
GO:0006979 all species →	Biological Process	response to oxidative stress	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11987	PTGS2, COX2; prostaglandin-endoperoxide synthase 2	EC:1.14.99.1	Pathways of neurodegeneration - multiple diseases	ko05022	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.