Gene detail

Detailed information of ENSAPQP00000023839.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3979438.1, Ankyrin repeat domain-containing 50 [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

ENSAPQT00000026672

ATGGATGTTAATAGAGAAATGAAAAGGGAATTTTATGGTCGTCAATGGCTCTTCGAAAAGATTCATGACACTGTAGAGAAAGGTAAAAATTTGGACTCGCCAAAGTATAGAGGTGTGGCAATACTCGGTCAAGCGGGTTCAGGAAAGACTTCAGTCTGTCTCCATTTGCTTCATCCGAATGAGAACGATAACATTCGAAAAGAATTGTCTGGAAATATTATCGCGTATCATTTTTGTGAGGCTGACAATCAACAATCGTTAGATGTTAGTGAGTTTATACGAAACCTAGCGTTACAGTTGTGTAAACATGAGAAACTTGCTAACTATAAACAACATTATAACTCGAGCGATATTCAAAATCTCGCAGAGAAAGAACACAAAAATGAAGATatcataaatatatttaagaaAGTTATTGTTGATCCACTCAAGGCATGTGAGGTTGAAAATCAGAGATTGCTTTTAATAGTTGATTCAATTGACGAATCATTGTTTGAAGGCAGCAGTTCGGACACTGATGTTATTACCATTTGTAGTTTACTCGTTATCGCCCTGCAACAGAACTTATTACCCCCATGGCTAAGATTAATAATCACTGCTCGCCGACAGTCTAGAGATGtaatgaaaatgttttctggttTAAAAAAGATTACCTTGGATGATCTAAAGAAATCCTATATAGTGAAAGATGTACAACAGTATATTTTAGATCGCCTTGATGTTGAGCCTGCCTTGAGGAAACACTTAACACGCGATACAGCCGAGCAATTTAATTTACTCCATGTCAAGAGTAATGGGTGTATTTTATACCTTGAACAAATACTAGATAACGTTATCAAGGGTGTTTTAACCATTGAGGATGTTAGTGACATTCCTGGAACATTAAATGGTTTGTATTTGTGGTTATGTCAGCGATTGTTTACAGAAGATGTTTATAACACACGACTGAGACCGATATTGGAGACATTTTTAGCAgcgaaacaaaacttgagttTTGATGATTTGTTTAACATCATCAGACTAGTGAATGATGGCGTTGATGAAAAGGATGTTCATGACACTTTAGACACCCTATCACCTGTGTTGGTCGAGGAGGATGGAAGCTATCATTTCCTTCACCATTCATTTAGTGAATGGTTGATTGATGTCAAGCATTGCACCCGACGGTTTCTGTGTAGTGTTGCTAAAGGTCATGCAATGCTAGCTGTTTATTTCATGTGTGGAGGTAAGACATTAACTCTACAAGAGAATGAGAGGTTCTTATGTCATTTGTTACAAAGTCAGTATCCTTCAAGTGACCCGACAAAAGTAGAACAGTGGTTGAAATGGAGTGGTGTACGTGCTGAAGAAGCAAGTTCATTGGGGGATAATATTAGAAGTGAAAGTGCACATAAACTTGGAGAAGTGCAAGCTGCATTGCTGCATTCGGAAGAACCTTGTGCTCCAAAGGAAAACGACCACGTCATATCCTACACTCCAAATCCAATAAATAACAACCTAGAGGAAGAAGATAAAGACTGGACACCACTCTTGAAAGCAGCACATAGTGGCAACTGTAAAGATGTACATTCTCTCCTTCAGAAAGGGGCAGATGTGAATTTTATTGATAGAACTGGTAGAACAGCCCTGAGTGTTGCAAGTGGTGAAGGTCATGTAAAGATTGTCCATGATCTCATAAACTGTGGTGCTGAAATAAACACTCGTGATTCCAGTGGTTGTACACCTTTGAGAGCAGCAGCGAGATGTGGTTCATCAGATACAGTGGCATTACTATTAAAACATGGTGCTATACCCGATCTGGCAGATAACAATCAGAGAACAGCTTTAAGGGCTGCTGCATGGGGTGGACATACTGATATTGTTCTTCAGTTGTTGCAGAAAGGTGCCGATCTCAATCATGTGGACAGGGAAGGTCGAACAGCTTTAATTGCAGCTTCTCATACTGGCTGTGTCAAGACTGTTGAAGTTTTGTTAGATCATGAAGCAAGTGTGAATCATGCTGATAGTGATGGAAGAACAGCGTTGGCTGTTTGTATAATGTCGGAGTCTTTAAACAACCATTTTGAAGTGGTAAAAGTTCTTTTGGAGAATGGTGCTGATGTAAATCATCCTGATTTTGATGGAATGACTCCTCTATGTTTGGCGAGCATGTTGGGTCATAAAGATGTTGTACATTTGTTGTTGGAGAAGGGTGCGGATGTGGGACATTGGGATCGACATGGTAGAACTCCGTTAATGTTAGCTTCAGCTAATGGACATCATACTGTTATGAAATTATTATTGGAAGACCAAAGAGCTAAACAGCCAAATATACCAAAGGAGGATTTCTTTAAAAAGGACAACTCCGGCTGGACACCTCTGTTAGTTGCTGCATTCAATGGATTTGAGTCAGTTGTTCAGCTGCTTCTGTTCTACGGTGCTTCATCAGGTGAGGTGGATGATTACAAGCGCACTCCGTTGATGCTTGCTGCACACGAAGGACACACTACTTTAGTAGAACAACTCATTTGTGCTGGATCTTCTGTGAATGCGAAATCACTTGAAGGGCGCACAGCCGTTCATTATGCGACGTTATATGGTCATATTGACTGCGTGGAAAAGCTATTGGAAAAAGAAGCTGATGTCAATATTTATGATAGTCATGGTATCACACCACTCAACTATGCTGCAAAAGAAGGTAACGCTAAATTATGCGAGGTGGTGTTGAAAGGTGGGGCGAAAGTGAATTGTCAAGATCCAAGTGGAAAAACGCCTTTACATACTGCAGCGTGGAGTGGGTTTTATAGCGTCGCTGAAAAATTGATTGAGTATGGTGCAGATGTTAATCATGTTGATCTGATGGGATATACACCATTAATGACAGCTGCCTGGAAAGGACATACTTCCGTTTTAAATTTCCTTCTGAAGAAGAACGCCACAGTTGATGTAGTATCCAGCAATGATAAAGCAACAGCTCTCAATATCGCCGCTCAAGAGGGACATGAAGATGTTGTTAAACTGTTACTGAACTATAATGCTTCCACATTGCCGGATAAATACGGTAGAGATGCGATGAAGGTTGCTCAACAAGCAGGAAATCGATCAGTGGTGAAAATTTTAGATTCCTTCAATTCCTTATCAATGAGTGATGGCAATTTTACCAACACTTTGAAGAGACAATTTCCCAAGTTAACAAAAGGCAGCTCGATGGAGAATGCATCGCCTGTACTGACAGGGAAACTGAACAAAAGCATAAAAAGAACGATGTCTACCAGCAGCTCGCGTGGCAAGAATGGCAGTGGAGAACTGGCTGATTCAAACACAAGCATCAGTTCAAATGATCCCTCCACGCCTTACGATGAAGAATACTCACATTCCTATTGTGGTCCGTTTGGAGAAATGTCGACCGGAATGTCCTCAATGTCAAGTTTAAAACAGAGCAAAACAACAGTATTAACAAGTTCTACTGTGGctattgatgatgatgttttCTTTGGAAGAGCTATGTCCAAGGATTCTGTTCATAAAATACCTTTTGATTTCAGTATTGCATATCATGGCTGTGATCCAGTTAACTTACGAAAGGCTTTGGACATGCCTGAAACAACGTTATGA

Transcript

ENSAPQT00000026672

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9ULJ7	Ankyrin repeat domain-containing protein 50 OS=Homo sapiens OX=9606 GN=ANKRD50 PE=1 SV=4
Q9HCD6	Protein TANC2 OS=Homo sapiens OX=9606 GN=TANC2 PE=1 SV=3
F1LTE0	Protein TANC2 OS=Rattus norvegicus OX=10116 GN=Tanc2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009357 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13606 all species →	Ank_3	Ankyrin repeat	Repeat	Interproscan
PF20703 all species →	nSTAND1	Novel STAND NTPase 1	Domain	Interproscan
PF00023 all species →	Ank	Ankyrin repeat	Repeat	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR049052 all species →	Domain	Novel STAND NTPase 1	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24198 all species →	ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21440	ANKRD50; ankyrin repeat domain-containing protein 50	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.