Gene detail

Detailed information of ENSAPQP00000024052.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3989317.1, Hypothetical predicted protein [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000026885

ATGGGGTATAAGATGAAAAAGAGATTCCGAATACTGAAGAGGAAAAGTCACAGTTTACATGATTTCTTCAGTTATCGTCACAGTATAAGTCTCAATGCTGAGGATTCGTCATTACGAAGATCAGCAAGTAGTGTGGATAGTAGCAGCAGATTTCACCTTCGAGACATCAGTCCTTCTCGACTGAGAGAAAGACATAAAAAACATGATAGGAAAAAATCAGATAAAGATTCTAAACTTTCACcatcaacaacaaaaaactttCGTTCATCATCCTCTTCATGGCTACCTGCATCATTTCAACAGATGTTCCCCTCATACAAATCAAAAACTGGTGACTTCAGAAGGTTGTTCAAAGATATTCCAGAAAGTGAGAAGTTAATAACAGattaTTCATGTGCATTACAAAGAGATATTCTAGTTCATGGTAGATTATATGTTTCACAAAGCTGGCTTTGTTTTTATGCTAATATATTTGGTTGGGAAACTTTGGTCACAATCAACTTCAAACATGTCACATCAATGACAAAGGAGAAAACTGCATTGGTTATTCCAAATGCAATTCAAGTTTGGGCAGAATCAGATAAGtattttttcaCATCGTTTGTATCAAGAGATTCGACATATCGTAGTTTGACACGAATATGGAGAAATGCCCTGTCAGATGAACCTGAATGCATACCAAACTTGATGAAAGCTGTTGGAAAATATGTAGATATTCATTCAGAGGATGTTGACAACAGCAGCCGGTGCAGTAACGATGAACTTCCATCAGATTGTGATGATGACATCATTATTGTTGATGaagatgttgatgttgattcCATGATAGACTCTGAAGAGCAACATTCTGGTGAAAGGCAAAACAGTAGTCCTACCAAAACAGAAGGAGATGACAAGTCATTGGAAGATAGGGAATCCTTGGCTTCTACGGTTCCTGATATTTCAGTATCTCCTGCATCGCCAAAAGAAGTCAAAGCTGAAGTTGAATCTAACAATAGTGATCAAACGTCCCCCACAAAGGTCGCCAATGGAACCGTCCCACGTAAAAAATCCTCAGAAACACGGCGGAGGTTTCCATTTCCCTTCAAGAGAGAATTTAGTCCATTAACGAgacgaaaaaatcaaagagCAAACAAAAAAGACAGTAGTACAGAAGACATGAATCATTTACATCGGGATAGCTTAATTGAGGAGGATGGCAGCGTTAGTGATTCCAATGAAGATGAGGAAGGTCCTGTATTATGTCCTTGTGAAAGTCATCTGAATCTCGAATGTCTGAATGAGGAATATGCTATTGATGTAGACCGACTGTACGAGTATCTGTTCACGGATTgtgatttttatcgcagtATTCGCTCAGCAAGGAAGCATTTCGATCTTGATATTGAACCGTGGGTAGAAGAGGACGAGAAGAAAAGACGCGCAGTCAAATACACTATTAATCTTGGTTTAGCGATAGGTCCAAAAACGTCAAGAATTCAGGAAAATCAGCAACTGGAAGCCAACGAGCCAGGACAGTATTACGTGGTGGAAACTAATGTAACAAATGAAGGTGTTCCTTATGCTGATAGTTTCGTCGTCGTTCACAGATACTGTCTTTCGAAAGTAAATGCGTATATGTCTCGACTTAGGGTAACGGCCACCGTCAAGTATGTTCGACCCGTCTGGGGATTTGTAAAGAGCATGATAACAAAGAACAGCACGGAAGCATTATCgacattttttgaatttttaaAGGGCTTCATTAGGACGGTCGAGGACGAGGCCGTCCTACCTCTAAGAAGGAGGTTAAATTCATCTAGGAAACGTTCACGACAGCAAACACAcgataaagaaataaaaggaGATGAAGCTCTCGAAGAAACAGGTGAATCTGTCGCTGTCACATCAGGAAAAGTTAGTGGAGTATTTTCGTCGTTCGCCAGCCGTACTTGGAGaGAAAACAATTGGTTCCTTGGTGCATTTCTATTCTTATTGATTCTCTTAATCGTTCTGAACATATATCTCAGCTACAGAGTAATTTCACTTGAACATTCAACAAAATCATGGGAAACGATTGGCTTAACCTCATCATTTAAGGACATGCCCACAAACATTGACGAGTTTCGTAGTTTATTATACAAACAACAATACATTCAAGCTATTCAATTTAAAAGGTGGCAGCATGTTCTTTCGACATCTATGCAGTTTCTACAGCAGGTACAAGATTCATTAATTGAATTACAACAGGAGGTGGAGAAACCATTGAGTACGTAA

Transcript

ENSAPQT00000026885

TAAATCCGGCTGATTTTTGcatctaaaataaaatatcatgTACAACTCCATATGTAGATAGGCAGATAGTAGGTTAGGTCGTGTAATAGATCTAGATTTCAGCGGTACTGCCAAATGCACGGAATTTGACTTCGCTGCGACCACAGTTAGTAGACCTGCGACTATACGATGAGATTGCAATGCACTGTAAGGTTGAAACAGTAAAGGAGATGAAGACGTTGATGTTATTAGGAGGGATAGTGAATTTTCTAAATAACCAAGATGTCTAACAGAAGCACATCAACGTTTACGTCTGCCTTATGGGGTATAAGATGAAAAAGAGATTCCGAATACTGAAGAGGAAAAGTCACAGTTTACATGATTTCTTCAGTTATCGTCACAGTATAAGTCTCAATGCTGAGGATTCGTCATTACGAAGATCAGCAAGTAGTGTGGATAGTAGCAGCAGATTTCACCTTCGAGACATCAGTCCTTCTCGACTGAGAGAAAGACATAAAAAACATGATAGGAAAAAATCAGATAAAGATTCTAAACTTTCACcatcaacaacaaaaaactttCGTTCATCATCCTCTTCATGGCTACCTGCATCATTTCAACAGATGTTCCCCTCATACAAATCAAAAACTGGTGACTTCAGAAGGTTGTTCAAAGATATTCCAGAAAGTGAGAAGTTAATAACAGattaTTCATGTGCATTACAAAGAGATATTCTAGTTCATGGTAGATTATATGTTTCACAAAGCTGGCTTTGTTTTTATGCTAATATATTTGGTTGGGAAACTTTGGTCACAATCAACTTCAAACATGTCACATCAATGACAAAGGAGAAAACTGCATTGGTTATTCCAAATGCAATTCAAGTTTGGGCAGAATCAGATAAGtattttttcaCATCGTTTGTATCAAGAGATTCGACATATCGTAGTTTGACACGAATATGGAGAAATGCCCTGTCAGATGAACCTGAATGCATACCAAACTTGATGAAAGCTGTTGGAAAATATGTAGATATTCATTCAGAGGATGTTGACAACAGCAGCCGGTGCAGTAACGATGAACTTCCATCAGATTGTGATGATGACATCATTATTGTTGATGaagatgttgatgttgattcCATGATAGACTCTGAAGAGCAACATTCTGGTGAAAGGCAAAACAGTAGTCCTACCAAAACAGAAGGAGATGACAAGTCATTGGAAGATAGGGAATCCTTGGCTTCTACGGTTCCTGATATTTCAGTATCTCCTGCATCGCCAAAAGAAGTCAAAGCTGAAGTTGAATCTAACAATAGTGATCAAACGTCCCCCACAAAGGTCGCCAATGGAACCGTCCCACGTAAAAAATCCTCAGAAACACGGCGGAGGTTTCCATTTCCCTTCAAGAGAGAATTTAGTCCATTAACGAgacgaaaaaatcaaagagCAAACAAAAAAGACAGTAGTACAGAAGACATGAATCATTTACATCGGGATAGCTTAATTGAGGAGGATGGCAGCGTTAGTGATTCCAATGAAGATGAGGAAGGTCCTGTATTATGTCCTTGTGAAAGTCATCTGAATCTCGAATGTCTGAATGAGGAATATGCTATTGATGTAGACCGACTGTACGAGTATCTGTTCACGGATTgtgatttttatcgcagtATTCGCTCAGCAAGGAAGCATTTCGATCTTGATATTGAACCGTGGGTAGAAGAGGACGAGAAGAAAAGACGCGCAGTCAAATACACTATTAATCTTGGTTTAGCGATAGGTCCAAAAACGTCAAGAATTCAGGAAAATCAGCAACTGGAAGCCAACGAGCCAGGACAGTATTACGTGGTGGAAACTAATGTAACAAATGAAGGTGTTCCTTATGCTGATAGTTTCGTCGTCGTTCACAGATACTGTCTTTCGAAAGTAAATGCGTATATGTCTCGACTTAGGGTAACGGCCACCGTCAAGTATGTTCGACCCGTCTGGGGATTTGTAAAGAGCATGATAACAAAGAACAGCACGGAAGCATTATCgacattttttgaatttttaaAGGGCTTCATTAGGACGGTCGAGGACGAGGCCGTCCTACCTCTAAGAAGGAGGTTAAATTCATCTAGGAAACGTTCACGACAGCAAACACAcgataaagaaataaaaggaGATGAAGCTCTCGAAGAAACAGGTGAATCTGTCGCTGTCACATCAGGAAAAGTTAGTGGAGTATTTTCGTCGTTCGCCAGCCGTACTTGGAGaGAAAACAATTGGTTCCTTGGTGCATTTCTATTCTTATTGATTCTCTTAATCGTTCTGAACATATATCTCAGCTACAGAGTAATTTCACTTGAACATTCAACAAAATCATGGGAAACGATTGGCTTAACCTCATCATTTAAGGACATGCCCACAAACATTGACGAGTTTCGTAGTTTATTATACAAACAACAATACATTCAAGCTATTCAATTTAAAAGGTGGCAGCATGTTCTTTCGACATCTATGCAGTTTCTACAGCAGGTACAAGATTCATTAATTGAATTACAACAGGAGGTGGAGAAACCATTGAGTACGTAACAGCACCTTGAACAGGAATCCTTGAGGCTTCTGACAAGATCGATTCTGTTGTGTTGAAGAAGAGCAAATACAAGGGCATGCTGAGCGCCGCCATTAAACTTCAGTGTACAAAATGACAGGGGGAGGTAAACGCAGGAAGGGGGAAAATATACCAACTTTCCTTCCTCGTTCCTCGTGATTTTCTTTACGATTTTTGGTAGAGTTTGTCAATGACTGCTATTTTCATTACACGAACGTTTGAGCGCGGTATTCGGCAGCTATGCATATTGATGCTTTCTGTCCgattaaaattataaatgaCACTAAAGGGGAAAAAAGGAACCCACTAATGGGCCAAAATTAGGTCCCGGATGCCAAGCTCTGTGCCATTAGCTATCGTTAACTAATAGCAACAGCCACAATTTGCAGCtgttttttggggggggggggggggaggggtgacAGTGCTCCGAACATTTATCTGAAAATCGTTCAAGACCACTGGCCATTGGCGTGAACATCTGGGATTTGAATAAGCCTCTTGGTGCCTTCTCTAGCGtcatttataattttgttgttCAGCATGTCTAGCCCGTCCTGGGTCGTGATCATGCACGGAGCTTGAGTGTGTTGATGTTCAGTGTTGCGACTGTCCATATGGATGTAAATCTCGCTGGTTCGAGATACTCCCGCATCCTGCTTGCTATAGTAGACTTACTGCTTGCGCATAGTATTAATTTActatttaaaaatgtatagTATTAATTTACTCATTCTTTAATTTATGTGATCAAATGCaaagtatataatattaattgaGACAGTACAATAgatgaaatattaatattagagttattgaattatttgtgaagtgtttgttttcgttttCTCGCCCTGAATATTCTGCTATGTCAGCTTTCACGGTTGAAATCGGAAAGTGAATTCATATTTACTACCATTTGGCTGTCCAGCTCGAATCTTAATCCCaatcccattttctattgttctTTTTGGTAAATG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3KR37	Protein Aster-B OS=Homo sapiens OX=9606 GN=GRAMD1B PE=1 SV=1
Q80TI0	Protein Aster-B OS=Mus musculus OX=10090 GN=Gramd1b PE=1 SV=2
Q3KR56	Protein Aster-A OS=Rattus norvegicus OX=10116 GN=Gramd1a PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001069 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16016 all species →	VASt	VAD1 Analog of StAR-related lipid transfer domain	Domain	Interproscan
PF02893 all species →	GRAM	GRAM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004182 all species →	Domain	GRAM domain	Interproscan
IPR031968 all species →	Domain	VASt domain	Interproscan
IPR051482 all species →	Family	Cholesterol transport domain-containing protein	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23319 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0032366 all species →	Biological Process	intracellular sterol transport	Interproscan
GO:0032934 all species →	Molecular Function	sterol binding	Interproscan
GO:0120015 all species →	Molecular Function	sterol transfer activity	Interproscan
GO:0140268 all species →	Cellular Component	endoplasmic reticulum-plasma membrane contact site	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000024052.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.