Gene detail

Detailed information of ENSAPQP00000024449.1 in Leptogorgia sarmentosa

Genomic Location: :...
NR annotation: CAB3990720.1, acid sphingomyelinase-like phosphodiesterase 3a [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSAPQT00000027283

TGTATGTTGGCGGTATATGggcaaaataataaatatcttTTAAACATTGAGAAATTGACAACCTAAAATATCTTATGTAATTTATATGCAAGTACTGTTTAAACTGTAGTGTTCCTGTTGATTTGCTACAGCTGAAACAGGCACGAAATTATGTTTGTCCGTGCCGGGTTGGTGATAGTGTTTGCTGGGCTAATATGTGCAAAGACCTTGGAGAAACATTTTATCGCAAACACGGACAAACCAGTATCATTTCTGCTGTTCTCTGACATTCATTTGGATTTAATGTACAAGAAAACGGCAGACAAACATAGCTTTTGCAGAAATGCAAACATGAAACATTCTCACATTGCAAGCTATGGTAGAATTGGATGTGATACACCGTTGGCTTTACTTCAGAATGCATTGTCTGCAATGAAACAGAAAACCAAGAATTTATCTAAACTGGACTTTATTTTAGTACCAGGTGACATGAGTCCACACCGTTTAAAAAAAGACAGAAGGGCACAAATTCTCAAAGCGATCAAGAAAATATCGGAAGAAACGCAGTCAGCATTTCCCAGTACTCCATATTTTCCCATTATTGGTAATAATGATCTTCCTGATGATTATGGAGCGCCTGATGAAGATGACACATGCTATTCTGATTTTCTAAATGTCTGGCAAGACGCCATTTTGTGTAAACATTGTAATAGAAAGCATCAGACAACAACGTTAAAAGAACTAcgtaaaacatttttatatgGAGGATATTACAGCGTGTCAATTGCAGATGGAACAATGACTTTGTTAATATTAAACTCACTACATTGGGCAAAACCTTTCTGGACACCGAGTGATCATGTAGATAAGAGAGCAAACGCCCAAATGGATTGGTTGGTGGAgcaatttaaacttgccagaaaaaataaaaagaagaTTATTATTAGCGGCCATATTTCTCTTGGGATGGATATCTACAGTCTTAGATCCACTTGGATGAGACAGTTTTCAGAACGATATATCGATCTGGTTGTGAATAAATATAGTGATGTCATCGCAGGTCACATCTTCGCTCATTTCCACCGGGATAGTTTTCGTTTGCTACGTGACAAGAAGAAAGATCCTTCATATCATAATTCATCCTACGTTTTACTTGTTCCATCGATATCTCCAAGTTACAGAAATAATCCAGCATTTCGCATTTTTCACCTCGATCCAGACTTGCAAGCTATCACGGATTATGAGCAATACTACACAAATATCACGAAAACAGTGAACAGCCCAGTGTGGCAACTGGACTACAAATTTTCCTCAAGATACCCACCAAGTGGAAAGGATGACCAAGTTATAAATGGCAAAAGGATAAAAAATTTGAGTGACAATCTTATCAACAAAAGAGATAACAGTGTCTTAAATGGCTACATCGCTTCACGTCAAGTTCGCCATCAGCCAGTTGATCCTCATTCAAAACTAATCTATTACTGTGCGATTACGTGCATAAGGAAAAAGGAATTTGATGTTTGTCAGAAAATGTATTCCTCTAAAAAACAGTCGtagcaaatacaaaattaagTACCTTAAAAACAGCTGTAACGAATTTTTTAATTCGTTCGTGATGGGAAGACCATGGGGAAGAGGTGATAATGGTATGGCACACCTGCACAAAAACTTTAGCGTTTAGGCGAACTCCTTCCCGGGGCTTCGCTATGAATTTGgcttaataaaaaaatcaggCGCGAACAATTTCTATGATGTTATTTATTTTCAGGTATTCTTTATAATAAGTATTACAACTCATGATCAAATTTGTATGGGGTATATATCATGAATTCTCCTATGATAATATGAGATCTTTCCCACACATACATTAGAACTATATATACGTGTGTGATAAAAACTTACAAGCCGCGTTTCGTTAAATAATCAGAATGTCAGCTACTCAGTATagcagtagctatatatatttgtgcAACAAATCCaagaaatgaatttttttgaaaaccagAATTTAATACGGTATGGGTATAATTTATGACTCAACCATCCCTGGTACTAAAGCCCTGTTTCCACTCAGGATAATTTTCTTGTGGAAAAGGACATCAGTTTTGCTCTGCTGACTTTTCTACAAACGAAACTTGATCATTCCTTTTCGTAGCAAATTCTCCTGAGTGCATAATTTAATCGTTGTGATTTATGGAAATGTTTAAATGTCAATAGTGTAGTGCGTAtgatgaaaataatgcaaGTTTGTTAAATTAAGTAAAAACAATGTTTCAGTTTGTGGAATGTTGCTTCTCTGATCAAGTTACCCGTGCCGCATAGTTACTTGTAGTATCGATCT

Protein

Uniprot

Uniprot term	Description
Q10916	Sphingomyelin phosphodiesterase 1 OS=Caenorhabditis elegans OX=6239 GN=asm-1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00149	Metallophos	Calcineurin-like phosphoesterase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029052	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR004843	Domain	Calcineurin-like phosphoesterase domain, ApaH type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10340	SPHINGOMYELIN PHOSPHODIESTERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016787	Molecular Function	hydrolase activity	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0008081	Molecular Function	phosphoric diester hydrolase activity	Interproscan