Gene detail

Detailed information of ENSAPQP00000024477.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028394908.1, homologous-pairing protein 2 homolog [Dendronephthya gigantea]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q63ZL2	Homologous-pairing protein 2 homolog OS=Xenopus laevis OX=8355 GN=psmc3ip PE=2 SV=1
Q91ZY6	Homologous-pairing protein 2 homolog OS=Rattus norvegicus OX=10116 GN=Psmc3ip PE=1 SV=1
O35047	Homologous-pairing protein 2 homolog OS=Mus musculus OX=10090 GN=Psmc3ip PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006543 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07106 all species →	TBPIP	TBPIP/Hop2 winged helix domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010776 all species →	Domain	Homologous-pairing protein 2, winged helix domain	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15938 all species →	TBP-1 INTERACTING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000709 all species →	Biological Process	meiotic joint molecule formation	Interproscan
GO:0000794 all species →	Cellular Component	condensed nuclear chromosome	Interproscan
GO:0003690 all species →	Molecular Function	double-stranded DNA binding	Interproscan
GO:0007129 all species →	Biological Process	homologous chromosome pairing at meiosis	Interproscan
GO:0010774 all species →	Biological Process	meiotic strand invasion involved in reciprocal meiotic recombination	Interproscan
GO:0120230 all species →	Molecular Function	recombinase activator activity	Interproscan
GO:0120231 all species →	Cellular Component	DNA recombinase auxiliary factor complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000024477.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.