Detailed information of ENSAPQP00000024618.1 in Leptogorgia sarmentosa

Genomic Location: chr3:20881430...20882693
NR annotation: no NCBI-NR hit recorded
Species Leptogorgia sarmentosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000956 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057
all species →		Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002172
all species →		RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR023415
all species →		Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR036055
all species →		Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR050685
all species →		FamilyLow-density lipoprotein receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24270
all species →		LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K25316racX, ygeA; amino-acid racemaseEC:5.1.1.10
D-Amino acid metabolismko00470deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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