Detailed information of ENSAPQP00000024638.1 in Leptogorgia sarmentosa

Genomic Location: :...
NR annotation: CAB3983196.1, very low-density lipo receptor-like isoform X2 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P20063Low-density lipoprotein receptor (Fragment) OS=Oryctolagus cuniculus OX=9986 GN=LDLR PE=2 SV=1
C0HL13Low-density lipoprotein receptor-related protein 2 OS=Sus scrofa OX=9823 GN=LRP2 PE=1 SV=1
P35950Low-density lipoprotein receptor OS=Cricetulus griseus OX=10029 GN=LDLR PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14670FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR051221FamilyLow-density lipoprotein receptor-relatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22722LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006898Biological Processreceptor-mediated endocytosisInterproscan
GO:0016324Cellular Componentapical plasma membraneInterproscan
GO:0042562Molecular Functionhormone bindingInterproscan
GO:0043235Cellular Componentreceptor complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20053VLDLR; very low-density lipoprotein receptor-Membrane traffickingko04131deepkoala

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