Gene detail

Detailed information of ENSAPQP00000025544.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3996171.1, rap1 GTPase-activating 1 [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

ENSAPQT00000028388

ATGAGTTTACCAAAACAGATCAAATCAGTTCGGCGGTGTTGGATGTCAAAACGATCAGGTAAATCGTTGACAGAGGTAGGGTATAATATTACCTTGGACTCAAATCTGAGAGCTTACCGTGATTATCACATTCGAACTTTTAATCGAAATAAGTGCGAAGTCATTCGAGGAAGTTCTGAGTCAATTTTCAAGGACAGTATGTCTGACACAGAGGACCTTTCGTCTGATGCGATGGAAAGACAATTCTCTCAAGGAATGgaagaattgaaaaattttaaaaaaagtaaTAATATTCCAGAAATTCCTCATCGTGGAACGGATAGTTCGGGCCACGACGGGATTTCATGGACTCATCATACAGATTATCAAAGCTCAGATGAATCTCCAGCGAAAGGAGCTGAAGAGAACCCTGTAAACTTTAACATTCAAGTGTATGAGGGTTATTTCTACGGCTGTAAACACTGGAACTTTTTCTCCGTTGATGACGACATAGAAGCTGTGATACTGAGTTTGAAAGTGGAATTATTACATGGGAAAGAATACATAagaaTCTTGGTACGAAGCTCGTTACGCAGCGTACATGTCACAACATCGCCATCCTTACTGGGAGTCTATGAACATTACAGCGACCCCTTCAGCTGGATTGAAACTCTCACACAACTATTGAAACTCACGAAGCCACTACAAGTTATCACTCATCACACTGCTGCTTTAGAACTTGCTAAACTTGAGAGGGTATTTGTGAAGTCTGACTTCAAGATTGGGGTGCTGTATGTCAAGCATGGACAACAAACTGAAGACGAAATATTCTCCAACACTTCACATTCTACTgcttttcaatcatttttaaatatgaTAGGAGATCATGTTAATTTACAAGGTTTTGAAGGCTATTCCGGAGGCCTTGATACATCTAACAGTCTCAATGGAACACAATCAATATACACTGAATATCGCAATAGTAGAATTATGTTCCATGTACCAACCTTAATGCCAAATTCTGGAGAAGACAACAAATACCTGGGAAAGAAAAGACATGTTGGAAATGATGTTCTTTGTGTGGTATTTACAGACCAACCTGAGACTACATTTTCACCTAGTTGGATTAAATCACAGTTCATTTATGCTTATATATTGGTCCAAGTGTTGCCTGATACTGCGGATTCTCGAATGAATTTCAAGGTTTCAGTGATTTGCAGACAAGAAGTACCTTGGTTCGCTCCAAAATTGTCCCACGACGGAACATTCAATGAAGGAGATACATTTCGAGAATGGCTCCTGGAAAAGATTATTAATGGTGACAGAGCTTGTTATAAAGCACCGAAATTTGCTTCAGTACAGCAAAGAACAAGATCTCAAATTATGCAGAGCATATTAGAAAAAGAAATAGCTATGGGCCCTGTTGATGAAAGAATCGGATATTCTTCATCTTTAACACCTTCTGAAAGTAGCAGTCTCGAAAGTTTAGAGGGGTTATTTCCTGATGATCCAGTCAATAACATCGATGATACAAGTCCTCAGCTGAAGTACTTTCACAGCTCACAAAGTGAAGGAATAAACTCTGGCGATGTGGCTTTCCTTGCAGGAAAGACGTATAAAAAGCGAATGTATGGAACGAGGTCTGTCATGTGTCGCAAAAGCAGAGTGTTTCGAGATATGCTAACAGATTGGGCACTTCCagcaaatttcatttcaaataataGCACGCAACTTAAAGATGACTCCCTGGTCAAACTTGCTTTGAAAAAAGCGAAAGCTCAGACTTTGatgcaaaataattcaaaaaaaggaaaatttgTGATGGAAACATCATTACCGAGTTTGACAAATTTTGATCGATACGTAACAACAACGTCAATCAAGGAAGGAGGACAAACATACGAAATATCCCTCGACTGCATGGGGAGAACTAGAGAGTTTGTCATGAATGAATTTGAAGCAGATATTTTCAGTGGCGTCATTGACTATATGCATAATGATAAATGCTCCATCACATACGAAACCTTGCCTGGTCTTCTTTGTGCTGCGACATATTATGAATTACCAGACCTGAGATTAAGTTGCTTAAATCGACGAGATGACGTCATTACAGTTTCAACAGTATGTCGCATGTTGAACATTGTGGAGGAATATATCTTTTTCAAAGACGGTAGAGAGCTGCAGGAAAAGtTACTGCAGTtctttgtaaaaaatattgtggAAATATCAAGTTGCAAggaatattttacattgctCACAAAAAGCAGGATTACTTTGGTTTTATCGCAAAACTGGAAGTGTGAAGAGAAGTTAAAAGGGAAAGCACTTGTTCTTTGGGCTAAATGCAGAGATACTGATGGCTGGAAAAAACTTGCCGAGTCAATCATGTCGTCTTGTTGCCAGATGAAAGGTGTTGTCTTAGATGAATCTCAACTCGATTTAACAGACAACGAAACAGATGAAAAGAAAGTTCACTGA

Transcript

ENSAPQT00000028388

aactgtttaaaatttcaagttttgCAGCCAGCTGGGTTATATTAAttgaaaacataaaatattgttatgaaaatttaatatttgaatACTGAAGAGCAACAACGTTAAGCCAGTCAGCTGTCAAAACTGAAAACGAGtgattatgaaaattgcattttaaTATCTTCACTCTGACGTTTCATTTGTGGATTTCTGTACGGCACAAGGTTCTCAAGGGCCAAAGGAGTGGTAGTAATATAACTGTAAGCGAAATATTACAATGAACACTATATATAGCGAAATATAGTTTCTGCATTGTCATGAGTTTACCAAAACAGATCAAATCAGTTCGGCGGTGTTGGATGTCAAAACGATCAGGTAAATCGTTGACAGAGGTAGGGTATAATATTACCTTGGACTCAAATCTGAGAGCTTACCGTGATTATCACATTCGAACTTTTAATCGAAATAAGTGCGAAGTCATTCGAGGAAGTTCTGAGTCAATTTTCAAGGACAGTATGTCTGACACAGAGGACCTTTCGTCTGATGCGATGGAAAGACAATTCTCTCAAGGAATGgaagaattgaaaaattttaaaaaaagtaaTAATATTCCAGAAATTCCTCATCGTGGAACGGATAGTTCGGGCCACGACGGGATTTCATGGACTCATCATACAGATTATCAAAGCTCAGATGAATCTCCAGCGAAAGGAGCTGAAGAGAACCCTGTAAACTTTAACATTCAAGTGTATGAGGGTTATTTCTACGGCTGTAAACACTGGAACTTTTTCTCCGTTGATGACGACATAGAAGCTGTGATACTGAGTTTGAAAGTGGAATTATTACATGGGAAAGAATACATAagaaTCTTGGTACGAAGCTCGTTACGCAGCGTACATGTCACAACATCGCCATCCTTACTGGGAGTCTATGAACATTACAGCGACCCCTTCAGCTGGATTGAAACTCTCACACAACTATTGAAACTCACGAAGCCACTACAAGTTATCACTCATCACACTGCTGCTTTAGAACTTGCTAAACTTGAGAGGGTATTTGTGAAGTCTGACTTCAAGATTGGGGTGCTGTATGTCAAGCATGGACAACAAACTGAAGACGAAATATTCTCCAACACTTCACATTCTACTgcttttcaatcatttttaaatatgaTAGGAGATCATGTTAATTTACAAGGTTTTGAAGGCTATTCCGGAGGCCTTGATACATCTAACAGTCTCAATGGAACACAATCAATATACACTGAATATCGCAATAGTAGAATTATGTTCCATGTACCAACCTTAATGCCAAATTCTGGAGAAGACAACAAATACCTGGGAAAGAAAAGACATGTTGGAAATGATGTTCTTTGTGTGGTATTTACAGACCAACCTGAGACTACATTTTCACCTAGTTGGATTAAATCACAGTTCATTTATGCTTATATATTGGTCCAAGTGTTGCCTGATACTGCGGATTCTCGAATGAATTTCAAGGTTTCAGTGATTTGCAGACAAGAAGTACCTTGGTTCGCTCCAAAATTGTCCCACGACGGAACATTCAATGAAGGAGATACATTTCGAGAATGGCTCCTGGAAAAGATTATTAATGGTGACAGAGCTTGTTATAAAGCACCGAAATTTGCTTCAGTACAGCAAAGAACAAGATCTCAAATTATGCAGAGCATATTAGAAAAAGAAATAGCTATGGGCCCTGTTGATGAAAGAATCGGATATTCTTCATCTTTAACACCTTCTGAAAGTAGCAGTCTCGAAAGTTTAGAGGGGTTATTTCCTGATGATCCAGTCAATAACATCGATGATACAAGTCCTCAGCTGAAGTACTTTCACAGCTCACAAAGTGAAGGAATAAACTCTGGCGATGTGGCTTTCCTTGCAGGAAAGACGTATAAAAAGCGAATGTATGGAACGAGGTCTGTCATGTGTCGCAAAAGCAGAGTGTTTCGAGATATGCTAACAGATTGGGCACTTCCagcaaatttcatttcaaataataGCACGCAACTTAAAGATGACTCCCTGGTCAAACTTGCTTTGAAAAAAGCGAAAGCTCAGACTTTGatgcaaaataattcaaaaaaaggaaaatttgTGATGGAAACATCATTACCGAGTTTGACAAATTTTGATCGATACGTAACAACAACGTCAATCAAGGAAGGAGGACAAACATACGAAATATCCCTCGACTGCATGGGGAGAACTAGAGAGTTTGTCATGAATGAATTTGAAGCAGATATTTTCAGTGGCGTCATTGACTATATGCATAATGATAAATGCTCCATCACATACGAAACCTTGCCTGGTCTTCTTTGTGCTGCGACATATTATGAATTACCAGACCTGAGATTAAGTTGCTTAAATCGACGAGATGACGTCATTACAGTTTCAACAGTATGTCGCATGTTGAACATTGTGGAGGAATATATCTTTTTCAAAGACGGTAGAGAGCTGCAGGAAAAGtTACTGCAGTtctttgtaaaaaatattgtggAAATATCAAGTTGCAAggaatattttacattgctCACAAAAAGCAGGATTACTTTGGTTTTATCGCAAAACTGGAAGTGTGAAGAGAAGTTAAAAGGGAAAGCACTTGTTCTTTGGGCTAAATGCAGAGATACTGATGGCTGGAAAAAACTTGCCGAGTCAATCATGTCGTCTTGTTGCCAGATGAAAGGTGTTGTCTTAGATGAATCTCAACTCGATTTAACAGACAACGAAACAGATGAAAAGAAAGTTCACTGAAAAGTATGCATTAATCCCCGACTGAATGCACCCGAGAATAAAGCCTGCCCCATCAGGCAGTTTACCTCGAATTCAGAATTGTGGTCAGTTAGAGGTCTGAACGCCTTACGTTTCAAATCTCTACTTGGTCCGGTTCCATTCATGCATCGTGGCCGAATTGCCTTGTGGTAAATGAACCAAATGCGAGGATGTAAAACCAAGAGGTACACGTGACGTAATGACGAAAGATGTGTTCCTACGACTGGGGAATGAACAGAAAAAGATGTCATAAGGAAATGAATAAATTCTGTGAAAAATCGTGGTTGACTCAGCGTATATGCTCAGGTTTcgtgattgaaaatatttattctaaAACGtgcaatataaatatttaaccTAATGCTACAGCACACTGAGCACCTTTGCACACGACAATAAGACCTGTTCAGGTTACGTTGATTAAATTAGGTATAAGCTGTGTTTACGAGGATTAGCAAATTAAGTATTaactcaaaatatttatttataattatggtatatatttttttaattcaaaatgtaaatatGGCATACATGGTAGTAGGATATATAGTTTTATAATGGTTAATAataacattattttattaaatttgaatgttgCTTATTTACGAATACATACAGTCATGGCGAAACCTGGCTGTTTTAAATCCGAGGTTTTCACCCACTCACCCACATTGGCAGGAGCAAGAGCatcctcgtacccagggtcttggaGCAAGAGCACCTGAGCTATCAAGGAGAGCTGCAGCAGAAttcattttgatgttgtttatcaaacttgaataaaaagcaaaagcCTTTTATttaagcaaaacaaaacactggttttcgttataatattttctgattCCATTCCAACAAGAACGAGTATGACATGGGTTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P47736	Rap1 GTPase-activating protein 1 OS=Homo sapiens OX=9606 GN=RAP1GAP PE=1 SV=2
A2ALS5	Rap1 GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Rap1gap PE=1 SV=2
Q5ZMV8	Rap1 GTPase-activating protein 2 OS=Gallus gallus OX=9031 GN=RAP1GAP2 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001315 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02145 all species →	Rap_GAP	Rap/ran-GAP	Family	Interproscan
PF21022 all species →	Rap-GAP_dimer	Rap/Ran-GAP protein dimerization domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035974 all species →	Homologous_superfamily	Rap/Ran-GAP superfamily	Interproscan
IPR000331 all species →	Domain	Rap/Ran-GAP domain	Interproscan
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR050989 all species →	Family	Rap1/Ran GTPase-activating	Interproscan
IPR000210 all species →	Domain	BTB/POZ domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15711 all species →	RAP GTPASE-ACTIVATING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0051056 all species →	Biological Process	regulation of small GTPase mediated signal transduction	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0090630 all species →	Biological Process	activation of GTPase activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000025544.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.