Gene detail

Detailed information of ENSAPQP00000025730.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3989375.1, conserved oligomeric Golgi complex subunit 3-like [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000028612

ACAAAGCATTCCATTGACAACATGGCGTCTTTTCCAAAAGATGTGAGAGAAAGACTGAGTCTTTGGGATGCTAAAGAAGACAGTCTGTCTCCTCTAACTGATGAAGAAAAAGATAGTGTGCTGTTGCTAACTGCATATTCTTCAAATCGTTCTATACCTTCAGAATTACCTGAAAAAGATGTTTTAACTTTACCTTCCAAACGAACCCACGGGGAGACATCAGAGGGAAAAAGCAGTGTGGACATATCTGATATTGATTTGGGATCAGCCAAGGTTGAAAATGCACAGCAGTTTTTCACATGGTTTGCCCAAGTGGAAAGTCAAATGGAAAGAGAACAAGAATCATCTTACCAcGCTTATTCTGAGCAACTAAAACAATACCGAGATCATTGTGATTCAATATTGAAGGAAATAACAGAAGCTTTAAGTTATCTTCAAgatttacaaaaacaacatctgtttgtttcaacaaaaacTGGTGCCTTACATGAAGCATGTGAACAGCTACTGCAAGATCAGacACAGTTAGTACAAATGGCTGAAAGTATAAGTCAcaaattatcatattttaatgCTTTGGAACAAATCAAGCAGAAATTGAACACACCAACCTTATCAGTGACCAATGATTCATTTGTACCGATGCTCTCACGACTTGATGAATGTATTGAATACATAAAGAGCAATCAAcatttcaaagaatctcagaCGTACTTGGTACGCTATAACCAATGTCTAAATGAAGCTTTGAACCTTGTCAAGACTCACGTCATTGACTTATTTAAATATGCAACAGCACAGGTTACGGCGAGCAGAAATGAAACTAGTTCAACTGATGGatcatttgctttgttttacGGAAAATTTCGCACGAACGCTCCGAGAATAAAGTCTTTAATGGAGCAAATCGAACACCGATTAACTGTTAGTATTGAGTATACATCCTTGTTGAAAGATTGCCATGAGTTCTACTTCACTCAGAGATACCAGCTGTTGGCTCCATGTATTGCAGATACAGTGGACAAAACCATTAAACAGCATCAACGAAATACTTGTGCTTTGGTTCGAAATGGTTGCTCTTTATTAGTACGTGTTAGTCAAGATGAATATCAATTgtatttccatttttttacTCAACCAAGTCCAGCTTTACACACTTTGTTGGAGAGTTTTTGTAATATTCTATACGATGCCTTCAGACCACTTATTATCCACATGAATCACATGGAAACCTTGACTGAACTTTGTAGTATATTGAAGGTGGAGATGTTGGAAGATCACGTTCGTCAGAAAGATATTTTGGCGGTGGTGTCTGTAGAAGTCAAGCAAGGATGGACGGCAAGACAGTCCTTATCACAGGTGCAAATGCCGGCATCGGTAAAGAAACAGCGATAGACTTGGCAAGACGAGGCGCTCGAGTAATAATGGCATGTCGTGATATGAAGAGAGGCGAGGAGGCTTTAAATGAGGTCGCAGAGAAGACAGGCAGTTCCAAGTTGGTGTTGAAGCAGCTTGACCTTGCTTCCCTTGCATCTGTCCGTACATTTGCAGAAGATATCAACAAGACCGAACCGGAGTTACATGTCTTGATCAACAATGCTGGCGTGATGATTCCATCTGAACGTCAAGTGACCAAAGATGGCTTTGAAATACAGATGGGAGTGAACCATCTGGGACATTTCTTGCTTACAAATTTACTTAttgatttattaaaatcatctcAGCCCTCTCGTATTGTCGTGGTGTCCTCTATGGCGCATTCTTCGACTACGTCGTCAACGTTCAACTTTGATAATTTGAATTCCGAGAAATATTATAGAAAGTGGGATGCCTATGGTCAAAGTAAATTGGCCAACATTCTGTTCACCCGAGAGTTGACAAAACGCTTAGAAGGCGCTGGTGTGACAGCCAACTCACTCCATCCCGGTGCAGTCAAAACAGAAATCAGCCGTCACATTGGCAGGATTGAGGCTATTGCATTTCAAATCATGTTTCTGTTCTTTAAGACTCCTACAGAAGGAGCGCAAACAAATATTCATTTGGCAGTTTGTGAAGAGGTAGAAGGCGTAAGTGGTTTGTATTTTGCTGACTGTAAGGTCAAGGAGACGTCAACGGGAGCTCAAGATGACGAAGCAGCTAAGAAATTGTGGGAGATCAGCGCTCAGCTTGTGGGACTGGAAACTACTATCTGAACACTACATTCCACAGCTAATTCCTTGTacttaatataattttaaaccaTTGTGAATGTAataaatttatcgtatttgtTTCTGTGTACCATCATCATTATA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96JB2	Conserved oligomeric Golgi complex subunit 3 OS=Homo sapiens OX=9606 GN=COG3 PE=1 SV=3
Q8CI04	Conserved oligomeric Golgi complex subunit 3 OS=Mus musculus OX=10090 GN=Cog3 PE=1 SV=3
Q16ZN9	Conserved oligomeric Golgi complex subunit 3 OS=Aedes aegypti OX=7159 GN=Cog3 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003294 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04136 all species →	COG3_N	Conserved oligomeric Golgi complex subunit 3, N-terminal	Repeat	Interproscan
PF20671 all species →	COG3_C	Conserved oligomeric Golgi complex subunit 3, C-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048320 all species →	Domain	Conserved oligomeric Golgi complex subunit 3, N-terminal	Interproscan
IPR016159 all species →	Homologous_superfamily	Cullin repeat-like-containing domain superfamily	Interproscan
IPR007265 all species →	Family	Conserved oligomeric Golgi complex, subunit 3	Interproscan
IPR048685 all species →	Domain	Conserved oligomeric Golgi complex subunit 3, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13302 all species →	CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005801 all species →	Cellular Component	cis-Golgi network	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0006891 all species →	Biological Process	intra-Golgi vesicle-mediated transport	Interproscan
GO:0007030 all species →	Biological Process	Golgi organization	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0017119 all species →	Cellular Component	Golgi transport complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000025730.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.