Gene detail

Detailed information of ENSAPQP00000026001.1 in Leptogorgia sarmentosa

Genomic Location: :...
NR annotation: XP_028405672.1, uncharacterized protein LOC114528243 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSAPQT00000028957

TGTAATTGTTTGCAGCTTGAGTCAAATACTGTGTGAAAAGGCAAGATTCACAAATAAGACTACTATTATATATTTCTGCTATAAATGAATTGAGTCAACTGACTTAGAAGCAATTTTTCCTCAGGGTTATAACCTCAGTAAGTGGCCAATTATTTGCTTCTTATATATACAGATGGGTATCTTTTTGGTTCTCAGTACACAACATTCACAAGTTGCATAGGAATTTTACAGTCATGTTTTCTCTCTTTCAGGATAACCCATCGCAATCAAAGAGCTCTGTTCGAAAGCCAAAAATACCTGGCAAACATGGAGATGCAAGTCACCAAAAAAGTGAGGCAGGATCTGATCTTAACAAGAACGAACAAGTGAACAGTGATTATACTTATGCTGGTGTAGAATTTAGACCTTTAGAGATAACCGACGAAGGAGGCATTAGTACTGCAATTGTCGCTGGTAGTAAATCTGCAAAAATCCCACAAAATGAGTTAAAAGCCTACGAAGAGGTGACTATTCATGATGGAGAATTTGATAAGATTAAtcctggaaatattttgttgaagtCAGCTGATAGTGGTGAAAGTAATAgtgctttaaaagcttttaCTGCAGATATGCAACAGCCAACGCACGAAGTACATTCTGATACACACACAGGAGTAGATAATCATCAAGCACGAAAAAAGCCACCACCCATGCCAAAGCCATATTCAAAGGCAAGGGATAATGTTGATGCAACAGATGGTGGAAAGAAGAAACCTCCACCGCTTCCCAAACCTTACAGTGCTCATAAAGACGAAGAGCCTAGTGAACCATCTGATGAGGTGATTGTGGATGCTGGTTGTGTGTACGCGGTTGTAAACAAAAGTGCAAAACAGCAAATACTCGCAGACAAACCAAAGGCAGCAGAGGATGAACCACCCCCTCCTTTGCCCAGCCGACCAAACTTCGAAGCTGATGACGAAGTAAAAAAATCTCAGGAAGACTTGACGAAGGAAGAACCGCAACAAGAGAAGATTAGTAAAGGTTCGGGCATTATGAGTACAATTAAAAAACACATTCGACAAAAATCTGACGGAGGTCAGACAAAGAAAATTACAGAGAAATCAAAAGAACATGTGGTGAAAAAGAATGCTTCTAACGAGGCTTTAAATGAGAAACCTAATCCACCAATAAAAGCGTACTTAGTAACTGATATTGTCGCTCCTTCGTCAACTAAAGTTGTTGCTCCACCTTCAACGCAAATGTTTGGGGAACCAGAAATGTACGAGTCAGTGACTGATGGAAGAGAAGAAGAAATCCTACCCACTGGTGCGACAGATTTACCGGATGGTTGGCAAGAAGTCAAAGATTCAGGTGAAACCTATTATTGGCATGTTGCTAGTGGTACAACGCAGTGGGAAAAGCCAAAGAAATTAGAAGGTTCCGTGCCCACAAATAGCTCAACTCAACAACGTCCACCTGTAATTCAACAGAAACCCAAGTCAAAACCAGAGTCGAAAACGGTACGTTTTGAAACTtgagcaaattttgaaaaattttcaaacaataataCAAACCCCCCACAGAATGATTTAGACTTACTTTTACCGTAAACATGGCAATTTTTTTCATCTGTTGAAAAAGACACCCAACACCCCAGGGggttgaaaatttaaatatccAATTTTTCATTCATCCTACATTTTAAGTACCAAAACGAtcgagcgatttcaaattcttGTTTCTTTCTTACGAATAACCTCATCAATAGAAGTATCATGTTAAAATCACTTTATACTAATAATACTGCTATTAATTAATTCTTATAAATTTTTGGATGTGTGGTCACGTTTGTGGTTTGCACTACTTCTGTCGCTGTATAATGAAATAGCATTTATGGCAGTGAATGAGTTCGTGCACAAAATGTTATACTAATTAATCATGCTTTGTCTTGTATTCATACTAGCTAACACCTATGAATACGCCGGCTTttccaaaataattatttgtaaCTATTGCTTTGTTTAGAAAATTCACTACGATAAGCTTTTAAGATCTTGTTTGGAGATTTCGTATTTCTAATGGCATTGTAAGAGATACTGCACCTGCTATACCCCGTAGGGCATAGTCGTTTGTTGACTTGTTGTTAAtgatatgcatgcatatatgtAAGCGTCACCCGCCTTTTCCATGCAGCAACAAAACacaattattttcatgttgAATTTTACAAATGACTTGACGTAGGAGTTGACAGGATTGATTAGCCTAATATAGAC

Protein

Uniprot

Uniprot term	Description
Q8R1C9	Amyloid-beta A4 precursor protein-binding family B member 3 OS=Mus musculus OX=10090 GN=Apbb3 PE=2 SV=1
O35827	Amyloid-beta A4 precursor protein-binding family B member 3 OS=Rattus norvegicus OX=10116 GN=Apbb3 PE=1 SV=1
O00213	Amyloid beta precursor protein binding family B member 1 OS=Homo sapiens OX=9606 GN=APBB1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00397	WW	WW domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001202	Domain	WW domain	Interproscan
IPR039576	Family	Amyloid beta precursor protein binding family B member 1/2/3	Interproscan
IPR036020	Homologous_superfamily	WW domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14058	AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0001540	Molecular Function	amyloid-beta binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan